Package: SEtools
Type: Package
Title: SEtools: tools for working with SummarizedExperiment
Version: 1.4.0
Depends: R (>= 4.0)
Authors@R: person("Pierre-Luc", "Germain", email="pierre-luc.germain@hest.ethz.ch", role=c("cre","aut"), comment=c(ORCID="0000-0003-3418-4218"))
Description: This includes a set of tools for working with the SummarizedExperiment class, including merging, melting, aggregation and plotting functions. In particular, SEtools offers a simple interface for plotting complex heatmaps from SE objects.
Imports: S4Vectors, SummarizedExperiment, data.table, pheatmap,
        seriation, ComplexHeatmap, circlize, methods, BiocParallel,
        randomcoloR, edgeR, openxlsx
Suggests: BiocStyle, knitr, rmarkdown, ggplot2
biocViews: GeneExpression, Visualization
VignetteBuilder: knitr
License: GPL
Encoding: UTF-8
RoxygenNote: 7.1.0
BugReports: https://github.com/plger/SEtools
git_url: https://git.bioconductor.org/packages/SEtools
git_branch: RELEASE_3_12
git_last_commit: 035e0cc
git_last_commit_date: 2020-10-27
Date/Publication: 2020-10-28
NeedsCompilation: no
Packaged: 2020-10-29 03:23:28 UTC; biocbuild
Author: Pierre-Luc Germain [cre, aut] (<https://orcid.org/0000-0003-3418-4218>)
Maintainer: Pierre-Luc Germain <pierre-luc.germain@hest.ethz.ch>
Built: R 4.0.3; ; 2020-10-29 13:55:27 UTC; windows
