GetTD {SCnorm} | R Documentation

## Fit group regression for specific quantile and degree

### Description

This is an internal fitting of the group regression. For a single combination of possible tau and d values the group regression is fist fit, then predicted values are obtained and regressed against the original sequencing depths. The estimates slope is passed back to the SCnorm_fit() function.

### Usage

    GetTD(x, InputData)

### Arguments

`x` | specifies a column of the grid matrix of tau and d.
`InputData` | contains the expression values, sequencing depths to fit the group regression, and the quantile used in the individual gene regression for grouping.

### Value

estimated count-depth relationship of predicted values for one value of tau and degree.

### Author(s)

Rhonda Bacher

[Package SCnorm version 1.12.1 Index]