7944656e65a83f46563219a466c2d108 *DESCRIPTION
5914d7f5dcce9b36f452e980ae11f324 *INDEX
d604a466216939d25fdda981235d3cbf *Meta/Rd.rds
c8771fa553ea6266fe1e2a71a30a9537 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
41a8135888740305790b119b2668e24c *Meta/hsearch.rds
6ce7e4f7bea903378f73a6760dd7ba42 *Meta/links.rds
cc6913510f781fed5dcdf2ca1b8126c9 *Meta/nsInfo.rds
a549ec359bf292142624635651ba3d00 *Meta/package.rds
eb146d1959d107db9d57fb2cae99790d *Meta/vignette.rds
540677ce775da22abb0f5b4b7468bf5b *NAMESPACE
95d8c304a020aef8380b4ee08521e48c *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/SCOPE
5b852e2ca6bad2aec5255c621668cc15 *R/SCOPE.rdb
c1ba54c4f11b2e653fa802aa7965debe *R/SCOPE.rdx
a62c8f31c9390d231d61c330552c003e *data/Rdata.rdb
384474e158ac29bd10372b2ba043c86e *data/Rdata.rds
11ded123d900be2dc4be0b62fa973720 *data/Rdata.rdx
896ee5cf11492ae4b0d65f855072ce63 *doc/SCOPE_vignette.R
2b99cb210da6f381e4adf2321300a186 *doc/SCOPE_vignette.Rmd
61424d056e953ebe3e3d8237ec4c3167 *doc/SCOPE_vignette.html
880f6311627079f047ed9824ef50baa8 *doc/index.html
1e9c0988e992371032f30ee5ca2dbce3 *docs/split_script.py
c12183e4c7b3cfa9f504cb21e463adae *help/AnIndex
4f66ad1b21d95a7eba6462a174f02967 *help/SCOPE.rdb
65c88971cb32f669ac75dbdd55656861 *help/SCOPE.rdx
b86f5d41536798551cd3c01602d18c43 *help/aliases.rds
60b816f84d366563e42346fc9a66f38a *help/paths.rds
f492f5b9556eea6dca7f58dcb20c3b10 *html/00Index.html
56c98c4f399bd238d4f004a5f5c20ff8 *html/QCmetric.scopeDemo.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
11893a9c7525a409f1f938ffecea44a5 *html/Y_sim.html
ea118de4b8f7f42e54ec7f0c18813803 *html/coverageObj.scopeDemo.html
0aa833687da54c95fcc09e7d7bbc8269 *html/get_bam_bed.html
9b142e1b91f08f3808468bd89e2f3486 *html/get_coverage_scDNA.html
a39fcb4314ad15c94e94a7e7e01ec408 *html/get_gc.html
f03f73c0e241a78b82b84928e0c3c671 *html/get_gini.html
c462b2e6d74bb6e7eecf434067c40907 *html/get_mapp.html
1853237f48932793076acf68bd0fb1bd *html/get_samp_QC.html
faf80d771841aa252c143a238a526931 *html/iCN_sim.html
a1664883603f3a203dae2fd03d6faee8 *html/initialize_ploidy.html
7870b99c136227e9c8e55473866a775a *html/initialize_ploidy_group.html
88ce7e9864784caa2822641a48675674 *html/normObj.scopeDemo.html
650fc5c935d45abe39f254952b8f9fad *html/normalize_codex2_ns_noK.html
2e2d1c31802ef90fc8ff09bc186ac442 *html/normalize_scope.html
63cb1116828fb1bb931ab5fda4ebd95f *html/normalize_scope_foreach.html
eec3a876d54518652e52d39e9367c708 *html/normalize_scope_group.html
d34d8d5d1789f4e623d39da94e033f41 *html/perform_qc.html
f264f1594e462b33778f19a727b51ac4 *html/plot_EM_fit.html
42c34b7bbf3825a9ade1062ec2373b8e *html/plot_iCN.html
33c0815ed3070eebabc9a6ac8476acfa *html/ref.scopeDemo.html
f15c0a8388518e4021ca10d546377420 *html/ref_sim.html
fe2a17a3893d226b6ae8c7244481985c *html/segment_CBScs.html
