annGO {NoRCE} | R Documentation

## Annotate the set of genes with the GO terms for a given species and assembly

### Description

Annotate the set of genes with the GO terms for a given species and assembly

### Usage

    annGO(
      genes,
      GOtype = c("BP", "CC", "MF"),
      org_assembly = c("hg19", "hg38", "mm10", "dre10", "rn6", "dm6", "ce11", "sc3")
    )

### Arguments

`genes` | List of mRNA genes. Supported format for genes is Hugo.
`GOtype` | Hierarchical category of the GO ontology. Possible values are 'BP', 'CC', 'MF'.
`org_assembly` | Genome assembly of interest. Possible assemblies are 'mm10' for mouse, 'dre10' for zebrafish, 'rn6' for rat, 'dm6' for fruit fly, 'ce11' for worm, 'hg19' and 'hg38' for human

### Value

data frame of the GO term annotation of the genes

[Package NoRCE version 1.2.0 Index]