plot_region {NanoMethViz} | R Documentation

## Plot region

### Description

Plot region

### Usage

    plot_region(x, chr, start, end, ...)

    ## S4 method for signature 'NanoMethResult,character,numeric,numeric'
    plot_region(
      x,
      chr,
      start,
      end,
      anno_regions = NULL,
      spaghetti = FALSE,
      span = NULL
    )

    ## S4 method for signature 'NanoMethResult,factor,numeric,numeric'
    plot_region(
      x,
      chr,
      start,
      end,
      anno_regions = NULL,
      spaghetti = FALSE,
      span = NULL
    )

### Arguments

`x` | the NanoMethResult object
`chr` | the chromosome to plot
`start` | the start of the plotting region
`end` | the end of the plotting region
`...` | additional arguments
`anno_regions` | the data.frame of regions to be annotated
`spaghetti` | whether or not individual reads should be shown.
`span` | the span for loess smoothing.

### Value

a ggplot object.

a ggplot object.

### Examples

    nmr <- load_example_nanomethresult()
    plot_region(nmr, "chr7", 6703892, 6730431)

    nmr <- load_example_nanomethresult()
    plot_region(nmr, "chr7", 6703892, 6730431)

[Package NanoMethViz version 1.0.0 Index]