4607e1f8dc8c393ed905e6196452183e *DESCRIPTION
0d7d43da21bd608b62293cb8cec2beae *INDEX
288759bdcf876ec8bfe34cd0d5dc599b *Meta/Rd.rds
aea11a510b6332d501c9e7b55ba3efd4 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
e0cec9c12995bb7124a562a8566954e8 *Meta/hsearch.rds
657587108eff3d9f148bedd6297a16d2 *Meta/links.rds
13a0bfc893e491e139459ac8aa692229 *Meta/nsInfo.rds
1d20b0da984821efff38b410d53d2da4 *Meta/package.rds
4f36ad00c7f8d500366a4465cf00d6e5 *Meta/vignette.rds
cdcb42b04205359c7a4e7c9b1b1aa622 *NAMESPACE
64850b61b619186ba39a356d074c88f6 *NEWS
e1f4dde66e67d1b13d90354b38dcbefd *NEWS.Rd
d6c68f1fe41ced6e98a766a3757313da *R/MinimumDistance
cff0c50978627adf2c06f504aacd6e1d *R/MinimumDistance.rdb
2277559d4c734106c1032353891351de *R/MinimumDistance.rdx
0e57e8c0ac03566174a91534cd0fff56 *data/md_exp.rda
d1eb803d6c58ff8f8174f739ad7a3699 *data/md_gr.rda
8a3e3917ec140296abace15fe80a7154 *data/trioSetListExample.rda
c21aac441fef5457295e4e035eb18465 *doc/MinimumDistance.R
19557bb092451f909640096564255f87 *doc/MinimumDistance.Rnw
7d933242dcd3346a0232a9a5b72eb392 *doc/MinimumDistance.pdf
495dce7ecfea26efbcd55f37b50ad9b3 *doc/index.html
e03ea25b8db06926dae3d1aafebd9c33 *extdata/F.txt
efc08f8a945c313599533f15913a337c *extdata/M.txt
95db2e3447bae89e33de8a32f7c27b22 *extdata/O.txt
85bbbd3aa787fd480ae50bb2ffcd8090 *extdata/O1.txt
54e6869d2875b8cd3642e6d6fc185860 *extdata/baf.rda
ffd852d6ef47afc2784d7424175a813b *extdata/exampleFiles.R
002e045dee6803f685d493dcf6940913 *extdata/logRratio.rda
1f4fa7c977cf5e93d1c7a01856de7339 *extdata/md_granges.rds
52ee010584bb394d03f0a8eea59b735a *extdata/mdgr.rds
af6d332ea2ddb50e64beefa03b484777 *extdata/pedigreeInfo.rda
8bb642a23b584fcbaf5fb2f7b7e1bd01 *extdata/pennCNV_MendelianProb.rda
52c879d772258c1e361cf27fc7aeff24 *extdata/sample.sheet.rda
26714615fc7a01e7c93b8d8035ea3f27 *extdata/trioSet12023chr12.rda
25b53aab37b8c902341b54cc3edf8ef6 *help/AnIndex
b64340c6833ef594b60599d8cf1954ab *help/MinimumDistance.rdb
68c3483e3a4e9a7bf675a76159751341 *help/MinimumDistance.rdx
bd21782f1647cff2a0ad75f3faec48db *help/aliases.rds
f519ced7ba11a044744a0654f46133e1 *help/paths.rds
19b407dc2504801accd8a29445487574 *html/00Index.html
0b0b00414ec5b1222f64c4c624db5250 *html/DNAcopyParam.html
24b62e201ac42041f78fa1d2224247b3 *html/Defunct.html
8fd3d7f996a467e453dad03be1909199 *html/Deprecated.html
c398da62d2e6aef50731470906d75f0a *html/FilterParamMD-class.html
ec96233c844adb6a01fc32e6191048b5 *html/FilterParamMD.html
ea7ef6085eee57d878608644145d824e *html/MAP.html
a92bca3b20309fa8d433cf647f6c7f8c *html/MAP2.html
277620d05f491e419bea5b1af44de233 *html/MDRanges-class.html
22801f82d1d4efb3a36ecb6fef759862 *html/MinDistExperiment-class.html
bfa4c5cb2c71754bd048099591b0afc2 *html/MinDistExperiment.html
760abf7026a56fcece1988238fba47db *html/MinDistGRanges-class.html
5418a6a9876c4a2cfe6ccf707a095294 *html/MinDistGRanges.html
38fd2ad7cf3d4d870adf1a11b1220632 *html/MinDistParam-class.html
1e0fe65c038faf38f47a1b1ef5a0ed65 *html/MinDistParam.html
883104317b000dbbfea3714524dbc4f5 *html/MinDistPosterior-class.html
827e34cd7431cd2b9a86339beda1f920 *html/MinimumDistance.html
5e1459f85b16b5679a8f4bdc5b603a8b *html/ParentOffspring-class.html
d179b2cd6d6b5e57467c15ae09df48d9 *html/ParentOffspringList-class.html
69b3e118c9c267cecf4a73fb2cf15b87 *html/Pedigree-class.html
8cb3dbecc48297945e715f988daabccc *html/Pedigree.html
37e2ae2d05f4ecb9f1c6d8dcd384859d *html/PennParam.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
913f5e3a22233ad231353785ec14a78b *html/TrioSet-class.html
797b5e584db8825d136d7334ee8e0e46 *html/TrioSet.html
5542e7f145d599842827fbe78231963c *html/TrioSetList-class.html
4f528d962ee9df7858ef76b9a3dcc7be *html/TrioSetList.html
15583f293580aa7fa3c680676989a25c *html/TrioSetListLD.html
ff23a4ce20525a6f271d55bdbc83a7e8 *html/acf2.html
58ef2d13ad636af02d014794efe48b2a *html/calculateMindist.html
5f004404f5b5d99c6e1f817318f19ecc *html/coercion-methods.html
530f7c8319ed01085ccaf129af528dfe *html/denovo.html
d5d49730e89814e15f199013f061a217 *html/exampleTrioSetList.html
e82d8d9bbcbec31fbdf0bdd0d3b88e52 *html/filterExperiment.html
290029ffbf0bcfff390160cfe330fe4f *html/mad2.html
53c8466d8660de351f6efcfcf3f0e6b4 *html/mdLegend.html
9b70ab3f5d33938d44c676eb2f8e09d6 *html/md_exp.html
21967c91b935a896dff59950ef3ea7a2 *html/md_gr.html
23fe1420b2a03f6dbfe22aa245d56023 *html/mindist.html
05f75348f4fac52c2d7600dc97f42db9 *html/nMAD.html
b31ce8a75df631196d5ac3edcde135d3 *html/pedigreeGrid.html
a4f319d418b37e95d65c31cd0d34fff6 *html/pedigreeName.html
13bf4ed43a7699024952333cea4a23dc *html/pedigreeViewports.html
138c1fafe4b65bb6d1564347efcc38b0 *html/plotDenovo.html
e521e00cf61d2da49570cfce617e4c42 *html/range-ILimit-method.html
5e857fcff2ade85b157a2374945ab4db *html/segment2.html
8b1703686f0ca0a0e7b3e9e9ff381eaa *scripts/Affy2.R
15ff3c916756840de8888648ce5db0ed *scripts/Discordance.Rnw
de1aeda81e8c8ab6ded25df5ae2dbfab *scripts/Sweave.sty
a099ccea8ee43f05d160bcd257bb7afd *scripts/affy.R
3f33c8b63c426893a035c8f308a28ff5 *scripts/cleft_notParallel.Rnw
7e24f8634a31c17e346eb2286684ad37 *scripts/logR.baf.rda
ba7dfa59e03a85041de313b351b0f3c7 *scripts/runDiscordance.R
e1af4b14d6f30a4e4e0d1c044f671c51 *unitTests/Makefile
68b329da9893e34099c7d8ad5cb9c940 *unitTests/test_FilterParam.R
77e62a5014e356ab9d18448b2c0b384d *unitTests/test_MinDistExperiment.R
f1475ea1d62c4ffd452d99f92cd8350b *unitTests/test_Pedigree-class.R
781a05f56baa5e0dd8ec83790c5df78a *unitTests/test_PedigreeViews.R
77dfc64a92be3f977d0c916f43b20229 *unitTests/test_SnpArrayExperiment.R
e06a2b41fe11be4b705479117744ee1f *unitTests/test_TrioSetList.R
dc3c4b8f7bb58771e718df5fdc795973 *unitTests/test_calculateMindist.R
4540f66b68b46c13b9b426fe03cd204e *unitTests/test_callDenovoSegments.R
4587128861c0c33e9b8214229b5235a2 *unitTests/test_few_markers.R
c3e51589426259ed53a1a0441688468b *unitTests/test_posteriorCalls.R
f5434d8f5bb250791776114ce8fdb246 *unitTests/test_quads.R
68b329da9893e34099c7d8ad5cb9c940 *unitTests/test_rdsViews.R
2d2179773cc4e441499d731ccba69f3c *unitTests/test_splitsForCBS.R
