melissa_encode_dt {Melissa} | R Documentation

## Synthetic ENCODE single cell methylation data

### Description

Small synthetic ENCODE data generated by inferring methylation profiles from bulk ENCODE data, and subsequently generating single cells. It consists of N = 200 cells and M = 100 genomic regions. The data are in the required format for directly running Melissa and are used as a case study for the vignette.

### Usage

    melissa_encode_dt

### Format

A list object containing methylation regions, annotation data and the options used for creating the data. This in general would be the output of the `create_melissa_data_obj` function. It has the following three objects:

- `met`: A list containing the methylation data, each element of the list is a different cell.

- `anno_region`: Corresponding annotation data for each genomic region.

- `opts`: Parameters/options used to generate the data.

### Value

Synthetic ENCODE methylation data

### See Also

`create_melissa_data_obj`

[Package Melissa version 1.6.0 Index]