rea {MOMA} | R Documentation

## This function calculates an Enrichment Score of Association based on how the features rank on the samples sorted by a specific gene

### Description

This function calculates an Enrichment Score of Association based on how the features rank on the samples sorted by a specific gene

### Usage

    rea(eset, regulon, minsize = 1, maxsize = Inf, event.type = NA, verbose)

### Arguments

`eset` | Numerical matrix
`regulon` | A list with genomic features as its names and samples as its entries, indicating presence of event
`minsize` | The minimum number of events to use when calculating enrichment
`maxsize` | The maximum number of events to use when calculating enrichment
`event.type` | Type of event being analyzed
`verbose` | whether to print extra progress statements

### Value

A list containing two elements:

groups

  Regulon-specific NULL model containing the enrichment scores

ss

  Direction of the regulon-specific NULL model

[Package MOMA version 1.2.0 Index]