VarTable {LinkHD} | R Documentation

## VarTable

### Description

Accessor to Table with the selected variables from VarSelection output.

### Usage

    ## S4 method for signature 'VarSelection'
    VarTable(x)

### Arguments

`x` | an object from VarSelection class.

### Value

VarTable data.frame with the name of input tables in the LinkData function

### Examples

    {
    data(Taraoceans)
    pro.phylo <- Taraoceans$taxonomy[ ,'Phylum']
    TaraOc<-list(Taraoceans$phychem,as.data.frame(Taraoceans$pro.phylo),
    as.data.frame(Taraoceans$pro.NOGs))
    TaraOc_1<-scale(TaraOc[[1]])
    Normalization<-lapply(list(TaraOc[[2]],TaraOc[[3]]),
    function(x){DataProcessing(x,Method='Compositional')})
    colnames(Normalization[[1]])=pro.phylo
    colnames(Normalization[[2]])=Taraoceans$GO
    TaraOc<-list(TaraOc_1,Normalization[[1]],Normalization[[2]])
    names(TaraOc)<-c('phychem','pro_phylo','pro_NOGs')
    TaraOc<-lapply(TaraOc,as.data.frame)
    Output<-LinkData(TaraOc,Scale =FALSE,
    Distance = c('ScalarProduct','Euclidean','Euclidean'))
    Selection<-VarSelection(Output,TaraOc,Crit='Rsquare',perc=0.95)
    VarTable(Selection)
    }

[Package LinkHD version 1.4.0 Index]