a922f2544b436d4baea5537dd3cd5354 *CITATION
e2a00fb282905af695aa8eaf8a8f5ae8 *DESCRIPTION
e5ab8fc36593747faeecbb1631bab616 *INDEX
0407bf04aa713e49d7b89f2820691afb *Meta/Rd.rds
fc21dd21daabf6a781720a65c04cbf7c *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
874354fc2f91f42d199af9500abdbc44 *Meta/hsearch.rds
7398f01608c60746f5f51a098fc96fbe *Meta/links.rds
615594814ef06d9d34d0df7f1a6f29ac *Meta/nsInfo.rds
3f16cee25b2489f2077ae359eacb2dbd *Meta/package.rds
f3b89d00027d528c8fed5063dcc9836a *Meta/vignette.rds
861641a6de00d3a8bcf1b6ddae8b28a1 *NAMESPACE
177315f725b0cc008f084634756ecd0d *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/LOLA
0d5942c9fb7cd7b8a62d1b38ac5535af *R/LOLA.rdb
f8b548695773193749e0f854fc5b1599 *R/LOLA.rdx
0defdf6d57daf84628f1f4746e5c433e *data/sample_input.RData
4143de810969370e9d4dde813314c121 *data/sample_universe.RData
0b475857d7657740c39b6f4fb18c1fd7 *doc/choosingUniverse.R
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425efde37a16c5b3031cf5b94d3fefb2 *doc/gettingStarted.R
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7056a37af1bf9485325bf2b2da70e9ed *doc/gettingStarted.html
85222a6636e14ddad8fb7579293991a2 *doc/index.html
574c333d042dd6a52b0c3dba8dffa4ca *doc/usingLOLACore.R
09247d5a0ee802b06a452dd4a2d9f05e *doc/usingLOLACore.Rmd
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0abeb2e38c96db3c248da710a90ad5c4 *extdata/hg19/ucsc_example/collection.txt
d27f1ef73a44abc577b95ac8b7858098 *extdata/hg19/ucsc_example/index.txt
2efe7d09742fbd7d5668dcd0c8d15db3 *extdata/hg19/ucsc_example/regions/cpgIslandExt.bed
c91cf10ca317235a54ff5f26c2ddb51c *extdata/hg19/ucsc_example/regions/laminB1Lads.bed
77a3e268a8d6bf32613d5cfd46328eef *extdata/hg19/ucsc_example/regions/numtSAssembled.bed
b81ae934b502bda2ec59f31be5ee7675 *extdata/hg19/ucsc_example/regions/vistaEnhancers.bed
0d6aacd8d87eea2c5b1ccfc09971d561 *extdata/hg19/ucsc_example/regions/vistaEnhancers_colNames.bed
59cd3432078d90b537ef01021a9de7af *extdata/hg19/ucsc_example/sizes.txt
0abeb2e38c96db3c248da710a90ad5c4 *extdata/multi/collection1/collection.txt
d27f1ef73a44abc577b95ac8b7858098 *extdata/multi/collection1/index.txt
ec6fce6a86d27a7b09ceed833ce4b556 *extdata/multi/collection1/regions/cpgIslandExt.bed
a97b82aa363c1e9480170298f7fa3cbe *extdata/multi/collection1/regions/laminB1Lads.bed
01d9b39aebef8ea39e627474374c0d85 *extdata/multi/collection1/regions/vistaEnhancers.bed
2a6cddabb1aac76451c69a354f0b249f *extdata/multi/collection1/sizes.txt
d27f1ef73a44abc577b95ac8b7858098 *extdata/multi/collection2/index.txt
ec6fce6a86d27a7b09ceed833ce4b556 *extdata/multi/collection2/regions/cpgIslandExt.bed
a97b82aa363c1e9480170298f7fa3cbe *extdata/multi/collection2/regions/laminB1Lads.bed
01d9b39aebef8ea39e627474374c0d85 *extdata/multi/collection2/regions/vistaEnhancers.bed
2a6cddabb1aac76451c69a354f0b249f *extdata/multi/collection2/sizes.txt
7a50a0724c3eb5aba1fdbd843cbdb76c *help/AnIndex
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65387692a7b1b2a582d0b870b7e201d0 *help/LOLA.rdx
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276bf00adf0aab58859bd7a9c82ee32f *help/paths.rds
29475831e61a7e819c37d30d2d648ef3 *html/00Index.html
2721f3efb96b4eab975f9a233825e58a *html/LOLA.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
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d9ce0b4302f3e141c29d280e022757ba *html/cleanws.html
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7b53c8bbe1c84bb068e5de2d13ea8a77 *html/extractEnrichmentOverlaps.html
3ef2f16c88a1b5363ec9c2ce2c91c249 *html/getRegionFile.html
82e3c6bcf4f166c2f2f82db923dca32d *html/getRegionSet.html
89b0f90897cc9befcf83f3b56eaac947 *html/lapplyAlias.html
012ca192d2ab967d8722cf461ce5f352 *html/listRegionSets.html
2306b560e6fb11d61a10eecd3ca3ad9c *html/listToGRangesList.html
dddaa094f382d680b6213b180116b760 *html/loadRegionDB.html
3c92143b1739d46b01256df515039cfc *html/mergeRegionDBs.html
cc792029f7900b32f335223ca32305a5 *html/nlist.html
baa3127e1265fc4b5540385e1fca9864 *html/plotTopLOLAEnrichments.html
c37e147c566cb9cc7f4bc0deae12c3f1 *html/readBed.html
f97694de56753b9e1393cfe8c915aa49 *html/readCollection.html
9105762493ddc037299e0b3ac2bbb6f2 *html/readCollectionAnnotation.html
10e5fea5232509a26f9c4d2f758b9da4 *html/readCollectionFiles.html
f4a9d7c1f62188316dd7d158e4c77592 *html/readRegionGRL.html
81e0960217a7504cbcfb39a7df87b971 *html/readRegionSetAnnotation.html
0f230a280eb40959c6d636842fc00753 *html/redefineUserSets.html
e7704ad06e3f3095d35949bf73e5715a *html/replaceFileExtension.html
ab020cfc96ca8464dd9845ea3a43a666 *html/runLOLA.html
e41ac7f4e37a4353843acbfa89e8d990 *html/sampleGRL.html
23569b0507a8d3e0430d20551f40bcaf *html/setLapplyAlias.html
87ed80f33df744428e82cf30fc8b3af6 *html/setSharedDataDir.html
53bdba431e91224afd587176b1fb07e4 *html/splitDataTable.html
6db0f59d5f06efe63ca5eb9183ba3fe9 *html/splitFileIntoCollection.html
9c83e956def5cec22ea2a439f62cd240 *html/userSets.html
ece104517e7f68e5120b1594b5d486a7 *html/userUniverse.html
d543f17fff02bc2ef501eddd497e4388 *html/write.tsv.html
00f8151fe4cf28df5311e54f08ca95c3 *html/writeCombinedEnrichment.html
eb8ff1962ecd39e9f206aaf73d2e4bf6 *html/writeDataTableSplitByColumn.html
6662a2735721f99529114c9c0c1a95e4 *scripts/LOLA
9595f1d5872061b4579af26ce4312b3b *web/README.md
9ac4c1b58eb85c014914f58e550400a9 *web/allEnrichments.tsv
a56acab8071107b03b848f632263c644 *web/index.html
9d6c306930e625fdd0c9fd13c2c7ffdb *web/webComponents/ajax-loader.gif
592477d76c8e6a9898b729f9608becd2 *web/webComponents/d3.min.js
d307496efe5fbac7d5164c5ef8536971 *web/webComponents/gridstyle.css
