hg19_blacklist {HiCcompare} | R Documentation

## BED file for hg19 blacklisted regions

### Description

A BED file with regions which may be excluded from your Hi-C data analysis.

### Usage

    hg19_blacklist

### Format

A data.frame with 3 columns and 1649 rows:

chr

  chromosome for the region

start

  start location of the region

end

  end location of the region

### Value

A data.frame

### Source

Data from UCSC http://genome.ucsc.edu/cgi-bin/hgFileUi?db=hg19&g=wgEncodeMapability

[Package HiCcompare version 1.12.0 Index]