hg38_blacklist {HiCcompare} | R Documentation

## BED file for hg38 blacklisted regions

### Description

A BED file with regions which may be excluded from your Hi-C data analysis.

### Usage

    hg38_blacklist

### Format

A data.frame with 3 columns and 38 rows:

chr

  chromosome for the region

start

  start location of the region

end

  end location of the region

### Value

A data.frame

### Source

Data from http://mitra.stanford.edu/kundaje/akundaje/release/blacklists/hg38-human/

[Package HiCcompare version 1.12.0 Index]