plot_expression_profiles {GWENA} | R Documentation

## Modules expression profiles

### Description

Plot expression profiles for all modules with eigengene highlighted

### Usage

    plot_expression_profiles(data_expr, modules, ...)

### Arguments

`data_expr` | matrix or data.frame or SummarizedExperiment, expression data with genes as column and samples as row.
`modules` | vector, id (whole number or string) of modules associated to each gene.
`...` | additional parameters to pass to ggplot2::theme

### Value

A ggplot representing expression profile and eigengene by module

### Examples

    df <- kuehne_expr[1:24, 1:350]
    net <- build_net(df, n_threads = 1)
    detection <- detect_modules(df, net$network, detailled_result = TRUE)
    plot_expression_profiles(df, detection$modules)

[Package GWENA version 1.0.1 Index]