MSigDB.TF {GIGSEA} | R Documentation

## MSigDB.TF

### Description

Gene sets that share upstream cis-regulatory motifs which can function as potential transcription factor binding sites.

### Usage

    MSigDB.TF

### Format

A list with two items:

net

  a sparse matrix, the connectivity between terms and genes, comprising 615 TFs (column) and 12774 genes (row)

annot

  a data frame, description of terms

...

### Source

software.broadinstitute.org/gsea/msigdb/collections.jsp#C3

[Package GIGSEA version 1.8.0 Index]