AssaySubset             AssaySubset constructor
AssaySubset-class       An S4 class to create subset objects to store
                        inside an 'ExperimentSubset' object.
ExperimentSubset        ExperimentSubset constructor
ExperimentSubset-class
                        An S4 class to create an 'ExperimentSubset'
                        object with support for subsets.
altExp                  Alternative Experiment methods for
                        ExperimentSubset objects
altExp<-                Alternative Experiment methods for
                        ExperimentSubset objects
altExpNames             Alternative Experiment methods for
                        ExperimentSubset objects
altExpNames<-           Alternative Experiment methods for
                        ExperimentSubset objects
altExps                 Alternative Experiment methods for
                        ExperimentSubset objects
altExps<-               Alternative Experiment methods for
                        ExperimentSubset objects
assay,ExperimentSubset,character-method
                        Accessor method for assays in ExperimentSubset
                        objects
assay<-,ExperimentSubset,character-method
                        Setter method for assays in ExperimentSubset
                        objects
colData,ExperimentSubset-method
                        Accessor method for colData in ExperimentSubset
                        objects
colData<-,ExperimentSubset,DataFrame-method
                        Setter method for colData in ExperimentSubset
                        objects
colnames                Accessor method for colnames in
                        ExperimentSubset objects
colnames<-              Setter method for colnames in ExperimentSubset
                        objects
createSubset            Subset creation method for ExperimentSubset
                        objects
dim,ExperimentSubset-method
                        Dimensions retrieval method for
                        ExperimentSubset objects
metadata                Metadata accessor method for ExperimentSubset
                        objects
metadata<-              Metadata setter method for ExperimentSubset
                        objects
metadata<-,ANY-method   Metadata setter method for ExperimentSubset
                        objects
reducedDim              Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDim<-            Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDim<-,ANY-method
                        Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDimNames         Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDimNames<-       Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDims             Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDims<-           Methods for Reduced Dimensions in
                        ExperimentSubset objects
reducedDims<-,ANY-method
                        Methods for Reduced Dimensions in
                        ExperimentSubset objects
rowData,ExperimentSubset-method
                        Accessor method for rowData in ExperimentSubset
                        objects
rowData<-,ExperimentSubset-method
                        Setter method for rowData in ExperimentSubset
                        objects
rownames                Accessor method for rownames in
                        ExperimentSubset objects
rownames<-              Setter method for rownames in ExperimentSubset
                        objects
show,ExperimentSubset-method
                        Display method for ExperimentSubset objects
storeSubset             Method for storing new assays in
                        ExperimentSubset objects
subsetAssayCount        Count method for subset assays in
                        ExperimentSubset objects
subsetAssayNames        Name retrieval method for all subset assays in
                        ExperimentSubset objects
subsetColData           Accessor method for colData from subsets in
                        ExperimentSubset objects
subsetCount             Subset count method for ExperimentSubset
                        objects
subsetDim               Get dimensions of subsets in ExperimentSubset
                        objects
subsetNames             Get names of subsets in ExperimentSubset
                        objects
subsetParent            Subset parent hierarchy retrieval method for
                        ExperimentSubset objects
subsetRowData           Accessor method for rowData from subsets in
                        ExperimentSubset objects
subsetSummary           Method for displaying child-parent link
                        structure of subsets in ExperimentSubset
                        objects
