barcodeRanks            Calculate barcode ranks
chimericDrops           Remove chimeric molecules
controlAmbience         Ambient contribution from controls
defaultDrops            Call cells from number of UMIs
downsampleReads         Downsample reads in a 10X Genomics dataset
emptyDrops              Identify empty droplets
encodeSequences         Encode nucleotide sequences
estimateAmbience        Estimate the ambient profile
get10xMolInfoStats      Get 10x cell statistics
hashedDrops             Demultiplex cell hashing data
inferAmbience           Infer the ambient profile
makeCountMatrix         Make a count matrix
maximumAmbience         Maximum ambient contribution
read10xCounts           Load data from a 10X Genomics experiment
read10xMolInfo          Read the 10X molecule information file
removeAmbience          Remove the ambient profile
swappedDrops            Clean barcode-swapped droplet data
write10xCounts          Write count data in the 10x format
