3d469f3f11a41114e50a9bf328e03342 *DESCRIPTION
428d234ca810c6b2bb1867c5b3df63a2 *INDEX
4427743d040bdf4fa5e53567a872b4ce *Meta/Rd.rds
405ee5d49dbd81f2b72ca6923673e88f *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
ad02366203aa8fd1f046b2977dd9727c *Meta/hsearch.rds
630bdaeb5023f69d5520477aa6455253 *Meta/links.rds
aca06f310051df3872fe72d6f2496347 *Meta/nsInfo.rds
818f608a185ce57189c81732afe84d0b *Meta/package.rds
f658f2174730c95a7a785be65a588a7b *Meta/vignette.rds
df1dfca350441cf1c86346fcffe5a90f *NAMESPACE
fbcfccbc601e1c089eb3154fcca402e4 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/DIAlignR
c6940c99139f1c558a6366db43fbcadd *R/DIAlignR.rdb
3441633d7ac4f4f0318bddadee31703e *R/DIAlignR.rdx
29c08a96835a5a698142272205a3d089 *buildDIAlignR.txt
4bb7490619144f4e66a9db571f6fbba5 *data/XIC_QFNNTDIVLLEDFQK_3_DIAlignR.rda
e75c388725085ed10b50d1d82e354788 *data/multipeptide_DIAlignR.rda
0f59ca3fef808d83525241999e5c1c95 *data/oswFiles_DIAlignR.rda
209f11ae6b478625fdabe22541956702 *doc/DIAlignR-vignette.R
ce8ec6857c42e9c2bd77fbcad4262f42 *doc/DIAlignR-vignette.Rmd
0a81402a861dbbddb508dce137f0444a *doc/DIAlignR-vignette.html
9bb08db5030d3941a3e0a31699ab67d6 *doc/index.html
963c99919972ecef8e0ea3d6c6a6c939 *extdata/mzml/hroest_K120808_Strep10%PlasmaBiolRepl1_R03_SW_filt.chrom.mzML
20e48a08eff06f973e719d294211c5f6 *extdata/mzml/hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt.chrom.mzML
92f168fae0147e1aa4a0b4d30010240f *extdata/mzml/hroest_K120809_Strep10%PlasmaBiolRepl2_R04_SW_filt.chrom.mzML
b875308b7ddb90bf990abdb73c225803 *extdata/osw/merged.osw
3bfbee161a863033aa8c13183ecf66d5 *help/AnIndex
98d76dc5dbfcdd5eb528984b33a1ac9b *help/DIAlignR.rdb
12777ba811ab7cb6521e0816c154bcee *help/DIAlignR.rdx
c5b57874a87fc0159239633fa297213b *help/aliases.rds
c5e0a47b5dc66de6bc567964a0041a69 *help/paths.rds
053bd1db8728ee69050e85242cc6746e *html/00Index.html
89e10404af932e1665449ca8c5574db1 *html/AffineAlignObj-class.html
4382ec6ef70d6a893473a146c1132585 *html/AffineAlignObjLight-class.html
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854c7a638ee5657d1abe78ad52122525 *html/alignChromatogramsCpp.html
b5a07930c5618133e1f74a3c398773d8 *html/alignTargetedRuns.html
d60140bf92188059895454b8b6ef82be *html/analytesFromFeatures.html
2c9233bb0f73f3e31acf9bb79e296876 *html/areaIntegrator.html
9a4c44e6e5e123fcdd36e5be63787659 *html/as.list-AffineAlignObj-method.html
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6c583378e908f1b1b05cb010f4341899 *html/as.list-AffineAlignObjMedium-method.html
8a7e7f48ab27cdca43e882c30da24187 *html/as.list-AlignObj-method.html
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1c14ad495b3c8033b56174826873468e *html/doAlignmentCpp.html
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5b7db7e8ac5247afa27c965335ace355 *html/fetchFeaturesFromRun.html
ffa28e253408e136c81bf72eba7d8509 *html/fetchPrecursorsInfo.html
3d79a67a142d5dcc8b78bb8dead594f2 *html/filenamesFromMZML.html
82b1fa40414b200e7a879b1c9463a5f7 *html/filenamesFromOSW.html
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a769788ce4c012854f488302e916eab3 *html/getAnalytesQuery.html
082523f4bb7c1a7d720d855db0b539e8 *html/getBaseGapPenaltyCpp.html
6fa806459d127996ec2870da97962144 *html/getChromSimMatCpp.html
015ab7301fb673792b40b9da55f191d4 *html/getChromatogramIndices.html
3283fadcaf1a80126b874f82c2f0fb94 *html/getFeatures.html
ac3497391431b73dfcdb343b2f06410e *html/getFeaturesQuery.html
3fab820ea32c487bc464c4355ecd2344 *html/getGlobalAlignMaskCpp.html
27747e9398e03585e066c85993b584ff *html/getGlobalAlignment.html
ae3e7aa2d4e110e7acc1d530225aea68 *html/getGlobalFits.html
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4b1161e5f2d2e555305013ca2a808c05 *html/getMappedRT.html
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1e5cd3d5fbf0b054d1ee5e9edd1e6046 *html/getOswAnalytes.html
6a25bfaf0db1a489ccff7012921971af *html/getOswFiles.html
a8f1eef3b0904e82ec67446d2615a594 *html/getPrecursorByID.html
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805d4532626fa4be381c017623f7b427 *html/getPrecursorsQuery.html
4972223b1bcb5d7aff1b6fbb8b5e66f0 *html/getPrecursorsQueryID.html
a191362fd3c4d19acff3395b63ed95d0 *html/getQuery.html
25b472b4306c4b26c4db047882344ecd *html/getRSE.html
f98010bc6fe04e7b122deba09521fec6 *html/getRefRun.html
7e3a28a9bfa1d2f1d75739e9ec5f7c0c *html/getRunNames.html
7e1381e7a1ed8e19c1306cc9bc807f89 *html/getSeqSimMatCpp.html
9b4f6600e52dbcbe5faf15e8d8fb00a9 *html/getXICs.html
dfc49fd25000722f9b16678db32ed841 *html/getXICs4AlignObj.html
ee9340a2908c90031ad8cc0c26fb32c2 *html/mapIdxToTime.html
b20d64c8adb4dea6429161e7076094a0 *html/mapPrecursorToChromIndices.html
f93dadb0806d795f0eca9d510f9c4194 *html/mappedRTfromAlignObj.html
91b890d8d1a8d023078dbbd97effa6c9 *html/mergeOswAnalytes_ChromHeader.html
7657d44e686f267db37b34e13c18df6c *html/multipeptide_DIAlignR.html
d04b6b8d4c2a8fc730c70153e3d67f03 *html/oswFiles_DIAlignR.html
e039f7f4aa5f2ca27a78925b07e289cd *html/pickNearestFeature.html
a428d9144cd904b35f8fdf7d2900333c *html/plotAlignedAnalytes.html
03e71507d2272f2c90632e0bf839a681 *html/plotAlignmentPath.html
9d217eda666f3109c3dbfb488b8593a1 *html/plotAnalyteXICs.html
2f5774d3d53c7b15fd5e87e223ba6225 *html/plotSingleAlignedChrom.html
c298293bce70e59a2133d017b08582ad *html/plotXICgroup.html
900d40ada2f5012d08f091a2b7cf90f2 *html/readChromatogramHeader.html
d346a169e00ebaf78249b598beba9df7 *html/setAlignmentRank.html
93ed0b56515ce9ac216af9b46b60edcc *html/smoothSingleXIC.html
44a7122bd0dcf30d0fdff1a43bf7595f *html/smoothXICs.html
5468232177b1b260cf0b89ffb499fced *html/trimXICs.html
7687a5c8bd82a25efdb43f5297a3ee1e *html/updateFileInfo.html
1e79357ccd480d98bb6823be4aa7fb27 *html/writeTables.html
a2b1eae5cb662b0321411980ab79e74d *libs/i386/DIAlignR.dll
8f1e94abfbfbca5d9f91e8a97d6fe144 *libs/x64/DIAlignR.dll
