computeCoverageMovingWindowOnChr {DEScan2} | R Documentation

## computeCoverageMovingWindowOnChr

### Description

computes the coverage on a chromosomewith a set of moving windows of dimensions minWinWidth:maxWinWidth

### Usage

    computeCoverageMovingWindowOnChr(chrBedGRanges, minWinWidth = 50,
      maxWinWidth = 1000, binWidth = 50, verbose = TRUE)

### Arguments

`chrBedGRanges` | a GRanges to compute the coverage
`minWinWidth` | the minimum width of the window to use for the coverage
`maxWinWidth` | the maximum width of the window to use for the coverage
`binWidth` | the dimension of the bin in base number

### Value

RleList where each element is a window within the Rle of its coverage

[Package DEScan2 version 1.10.0 Index]