QuantileCentering {DAPAR} | R Documentation

## Normalisation QuantileCentering

### Description

Normalisation QuantileCentering

### Usage

    QuantileCentering(
      qData,
      conds = NULL,
      type = "overall",
      subset.norm = NULL,
      quantile = 0.15
    )

### Arguments

`qData` | xxx
`conds` | xxx
`type` | "overall" (shift all the sample distributions at once) or "within conditions" (shift the sample distributions within each condition at a time).
`subset.norm` | A vector of index indicating rows to be used for normalization
`quantile` | A float that corresponds to the quantile used to align the data.

### Value

A normalized numeric matrix

### Author(s)

Samuel Wieczorek, Thomas Burger, Helene Borges, Anais Courtier, Enora Fremy

### Examples

    utils::data(Exp1_R25_pept, package='DAPARdata')
    obj <- Exp1_R25_pept
    conds <- Biobase::pData(Exp1_R25_pept)$Condition
    normalized <- QuantileCentering(Biobase::exprs(obj), conds, type="within conditions", subset.norm=1:10)

[Package DAPAR version 1.22.9 Index]