splitReads {DAMEfinder} | R Documentation

## Divide read names by allele

### Description

Takes a GenomicAlignments object and returns a list of read names dividied by allele.

### Usage

    splitReads(alns, v, snp)

### Arguments

`alns` | GenomicAlignments object.
`v` | Nucleotide of reference (or alternative) allele.
`snp` | GRanges object containing SNP location.

### Value

A named list of vectors, each vector containing read names for each allele.

[Package DAMEfinder version 1.2.0 Index]