getIds-deprecated {ChemmineR} | R Documentation

## Import Compounds from PubChem

### Description

Accepts one or more PubChem compound ids and downloads the corresponding compounds from PubChem Power User Gateway (PUG) returning results in an `SDFset` container. The ChemMine Tools web service is used as an intermediate, to translate queries from plain HTTP POST to a PUG SOAP query.

### Usage

    getIds(cids)

### Arguments

`cids` | A `numeric` object which contains one or more PubChem cids

### Value

`SDFset` | for details see ?"SDFset-class"

### Author(s)

Tyler Backman

### References

PubChem PUG SOAP: http://pubchem.ncbi.nlm.nih.gov/pug_soap/pug_soap_help.html

Chemmine web service: http://chemmine.ucr.edu

PubChem help: http://pubchem.ncbi.nlm.nih.gov/search/help_search.html

### Examples

    ## Not run:
    ## fetch 2 compounds from PubChem
    compounds <- getIds(c(111,123))
    ## End(Not run)

[Package ChemmineR version 3.42.2 Index]