90f2fd9569ff1ab9a9e85c771e0dce40 *CITATION
de807ec90a8473c389db6b3632c0e537 *DESCRIPTION
1afbfbf1e439bb9f1460b3ec31d571c2 *INDEX
29a9012941a6bcb26bf0fb4382c5dd75 *LICENSE
ada90a6263208d86f4797daf033d95d4 *Meta/Rd.rds
a8e714ad59d3195bcf84aeb037222434 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
17fb286962ff31004fd9f39125efbc64 *Meta/hsearch.rds
4390b4737e82141936a47c8e36f0eb6a *Meta/links.rds
cd5ff06c27ec8c4e53ff6eb155ddd643 *Meta/nsInfo.rds
97e7a015d2c245b7cfe185ef69f08fdc *Meta/package.rds
ac4226a344aeb7037bb1524a9e1990f8 *Meta/vignette.rds
dc1d75887bfbbabfb69a798b3e62c807 *NAMESPACE
3aadbb010cdca8636bc58b6b8fe266c3 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/CAGEfightR
ea3c6297f312689eaf6d96c4f5dc884e *R/CAGEfightR.rdb
0e635cb73c514d24562838a5adb7fd5e *R/CAGEfightR.rdx
7efab3beaaab102472b04d0d82ee7a8b *data/Rdata.rdb
bbd9b562eaaf30fcd0fa5a06024880f5 *data/Rdata.rds
0256bcc079fadee0f2c5eeed8b1706e9 *data/Rdata.rdx
fc7d963ca2f0a9fbbb7ed62dacdea4a9 *doc/Introduction_to_CAGEfightR.R
9728419f0f7d7181bbce11d5ba46ba89 *doc/Introduction_to_CAGEfightR.Rmd
101c9905f496d2d63f863737e0ef0911 *doc/Introduction_to_CAGEfightR.html
3868bb4ec18148ed55d531bbe816e5e3 *doc/index.html
d1addb1b161c5d2d029a54dbf03aba45 *extdata/mm9.C547.minus.bw
12abbe7c0e853f44d353c3f819055f32 *extdata/mm9.C547.plus.bw
4c3a45077f5ecf6e93427c4800a0085d *extdata/mm9.C548.minus.bw
56befdc837745f8b2a5811e3ea94f8b0 *extdata/mm9.C548.plus.bw
246381ce67e76f4f772af9406fddd109 *extdata/mm9.C549.minus.bw
ac58aa74ba527e06166c70747ab63537 *extdata/mm9.C549.plus.bw
d9e2e06e8f1d7e09a790e5cd9fe934a8 *help/AnIndex
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8cdd446d2a33071e38be371fe15a6a08 *help/CAGEfightR.rdx
824e5a15e0e2a05f123e7aae6b3b9191 *help/aliases.rds
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5893e0ce7a124a176156e8f93739c805 *html/bwCommonGenome.html
28645bc1cc56f78d636c34027edc1112 *html/bwGenomeCompatibility.html
6fc9672ff8c0c5ef09a19f64b57efbef *html/bwValid.html
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4ceadd222aa28392bd8c907791d1028f *html/calcComposition.html
35223f62f921bb17c737123837d5341d *html/calcPooled.html
80bda065150a738d2167a8f22329ff4b *html/calcShape.html
4013a8aaa04ef919862b360e43de5db7 *html/calcSupport.html
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6754dce4e732e80ffd133714ed07b8a1 *html/checkCTSSs.html
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4b0a86525eb2923da98bf974ab336970 *html/clusterUnidirectionally.html
17af2d4a43839ec0cd96b56195ce8401 *html/combineClusters.html
846136b64579fe4d91943e756786cfb3 *html/convertBAM2BigWig.html
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b13ca576160bc03444f5bb6a710b0e6a *html/convertGRanges2GPos.html
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6b41da46477e1f7e3b526d45d61141df *html/findLinks.html
64fd6926680b7ba3825cf3970082eb24 *html/findStretches.html
5d443be1366538cfffcbe04f7c5d7cb6 *html/quantifyCTSSs.html
47ef5d2ebd67526d7b8630cbe137d996 *html/quantifyCTSSs2.html
171321c9d38e6e5c7c41ec422895b53d *html/quantifyClusters.html
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7fa471b400c53aabff4497d012b94131 *html/quickGenes.html
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9acc55cd875e7d18d32a3c995267c1b1 *html/shapeIQR.html
287429fe212535ad82e0dcee770ad501 *html/shapeMean.html
8db9051c6119dcd3c57de37377812bb5 *html/shapeMultimodality.html
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7ca55b50714f49680cbd3969d24d680c *html/subsetByComposition.html
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5179b5a06433918d4f220ff2b8785125 *html/swapRanges.html
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5b770aea1b46f4c4e6f971f87d669aed *html/trackCTSS.html
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ade8ce99cf110bc4895abb93f3d13983 *html/trackLinks.html
1a90dd13d600377ee3bd1c120298a7b9 *html/trimToPeak.html
e8a6ff6a7750a94c9517a3a88e923037 *html/trimToPercentiles.html
9baa24fd2bd4af56d6e93a18c18a2822 *html/tuneTagClustering.html
7adec604c8e3561f1c26798a26e6676a *html/utilsAggregateRows.html
72352f513dace774dd25926935ad6f70 *html/utilsDeStrand.html
ec15c211865c684c853071889cd19d94 *html/utilsScoreOverlaps.html
0316ac0c2efb735c7ef528cf31b8e6b7 *html/utilsSimplifyTxDb.html
