4f97238aa526201dc53bd048f419afc8 *CITATION
2741de25f72f9b77437a69491d649be8 *DESCRIPTION
5ac3917f11b0476e35f99fe02b31cb92 *INDEX
25de77306394cf836029e7afd744c7a1 *Meta/Rd.rds
eb57bebe48624912b30b95c5a662b0ec *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
9f5e4c9b57299886d670952c99932a6d *Meta/hsearch.rds
451ce06ba7524c23fa1475eb1caabe41 *Meta/links.rds
07f52e6b49671612836b0db24062dfd6 *Meta/nsInfo.rds
bb65b162b97680deb8577de120e65782 *Meta/package.rds
4b6b942d3fb7841fd9c0a54f981e12dc *Meta/vignette.rds
1834c60fdd14fe587e1ab86c9125b7f7 *NAMESPACE
0cf708227d96dc3c8f5b5edb245ce1a0 *NEWS.Rd
d6c68f1fe41ced6e98a766a3757313da *R/BatchQC
a7b7e9866d9e15f4ca1d25140bce2d60 *R/BatchQC.rdb
97099cc1f8253560ae103329a5cd073f *R/BatchQC.rdx
eba540185eda7dd1fd64fa04d565edf4 *data/example_batchqc_data.rda
f13fac0700b994278304bd85001d305f *data/protein_example_data.rda
2ee1948482b7a0947fea3163308a45ce *doc/BatchQCIntro.Rmd
8aaf91ce499c8ea9da92f99449d7a3f5 *doc/BatchQCIntro.html
be7482159d231cb0f42243cfcd2236ff *doc/BatchQC_examples.Rmd
d1a1cf5449a0431e5b3ed06d43fc2bbc *doc/BatchQC_examples.html
e3245ee24e4c3c02dc4a8f073d59669b *doc/BatchQC_usage_advanced.R
8b3ffd06e192642418fc652a0b02e30d *doc/BatchQC_usage_advanced.Rmd
d32c769ba35ad401dd4e68481b4ec0e6 *doc/BatchQC_usage_advanced.pdf
8bc760706be2e3b64b77e6307c29113a *doc/index.html
f434a8e72b4b9f0eb7e8b1bdffdc9b37 *example/batchqc_combat_adj_report.html
f0c9bcde568d0a055d5cbf52b0c85426 *example/batchqc_pipeline.R
4b2b1096080c7387889f1e4cf96ddf29 *example/batchqc_report.html
deda7a35f0f8c09ebc3e212a470d97bd *help/AnIndex
c52474b29603b6881d980a1d681b9dd3 *help/BatchQC.rdb
ec5fcc0d326bbe6689d421a5733f7a5d *help/BatchQC.rdx
14d6b781f0f45b3ddda067e20d451f61 *help/aliases.rds
f6f9857c9516470fc3c5b8e51034bde7 *help/paths.rds
ad0b360c3625ed22154fe519d0f85c5f *html/00Index.html
faa3b0076a8440c3c6552feb0bcaa1da *html/BatchQCout-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
fa88114399319ef1744f42c7e2cecd5a *html/batchQC.html
3ca935406f529c9f928842c2900ab4f0 *html/batchQC_analyze.html
4f867149c8c0933cf070b57cb66ac9bf *html/batchQC_condition_adjusted.html
256879a774ef11b9e6382e2cb030e773 *html/batchQC_filter_genes.html
45f19179fd75b30860e77ac49c892d14 *html/batchQC_fsva_adjusted.html
3971fdf0f5edf83819c63fe3b209814d *html/batchQC_num.sv.html
9bdeb288f2ecc5c5380caf543cd3c749 *html/batchQC_shapeVariation.html
56295fd3a829b3b7cdb581f5e4e95520 *html/batchQC_sva.html
818b76872eaa573fe645a5207ed61a99 *html/batchQC_svregress_adjusted.html
a88f03004c53e8e11ca8edee42773e0f *html/batchqc_circosplot.html
622a642dc1492b2795021be30840f42d *html/batchqc_correlation.html
37b112eb4d676866e5fcff363b28d929 *html/batchqc_corscatter.html
bc837c75176608b5cd96274023f46004 *html/batchqc_explained_variation.html
a6cbf7023215b084de704fd368bfec0a *html/batchqc_heatmap.html
5d32db660c83437527b528e6878e921a *html/batchqc_pc_explained_variation.html
8615bace26ea96016074b03c8c1df65f *html/batchqc_pca.html
d8dc93e024c0a6fcf3af0c57146996cf *html/batchqc_pca_svd.html
6dff3560788532659176b9ee45a2d7ae *html/batchtest.html
86d3cec66f019ad43c3565cc9a352e64 *html/combatPlot.html
33a990229a41cb8fac02fdd5c224a8dc *html/example_batchqc_data.html
44563feba2949d66e87c2850a2d1b2b1 *html/getShinyInput.html
91d51369693bb2af9b0a5d8758c63eae *html/getShinyInputCombat.html
e125863b33aa6e5f68784a965e6c4578 *html/getShinyInputOrig.html
953d45a5d4778f10faae4a0e12140fd7 *html/getShinyInputSVA.html
07db1348c7565790e109cf163b9b9723 *html/getShinyInputSVAf.html
cb16b981e07a2f3ebc48c70a1bf415fd *html/getShinyInputSVAr.html
a6d23de9c5ae00c3a43440f7613685a4 *html/gnormalize.html
a3340a8864c667e8121cbc743b617b16 *html/lmFitC.html
9d1f14229de435e5b892629a9ed0d3f8 *html/log2CPM.html
5fca86ba161c1fa603efbf15aae67dbb *html/makeSVD.html
d59e4b123f780d9f3fa00e6da4d4a88d *html/pcRes.html
1cae9150539a306697e94e489ffda9f1 *html/plotPC.html
4d42a96d8702e029b15243f20c05dd9b *html/plot_genewise_moments.html
927eab625b1a0c0740a2038c82ea0e3f *html/plot_samplewise_moments.html
67a3f06d5b341366c5f474220012c1b2 *html/protein_example_data.html
1ea6891957f0c671862a41f2beb99a03 *html/rnaseq_sim.html
f184623fcd616e4ed428dc00ac0baeec *html/setShinyInput.html
76cbe2bf7f8f5409dc231d26a386e8c5 *html/setShinyInputCombat.html
db8c09e2ba8820efe6db23d8ef08e4b7 *html/setShinyInputOrig.html
53be1fa4be846ee80cef44548b9b2ba0 *html/setShinyInputSVA.html
b3491dbe9797d10be2c4230584955c8d *html/setShinyInputSVAf.html
1dcd379c6a8f983512e70f80d106fd5b *html/setShinyInputSVAr.html
b82bc7b59add04d0daf658be91c02232 *reports/batchQC.html
200c671d341b91ee322a00ce4f61f466 *reports/batchqc_report.Rmd
f889adb0886162aa4ceab5ff6338d888 *reports/libs/bootstrap/css/bootstrap-responsive.min.css
4082271c7f87b09c7701ffe554e61edd *reports/libs/bootstrap/css/bootstrap.min.css
4a150670f77385a5dfcad362cd91fde1 *reports/libs/bootstrap/css/user.css
9bbc6e9602998a385c2ea13df56470fd *reports/libs/bootstrap/img/glyphicons-halflings-white.png
2516339970d710819585f90773aebe0a *reports/libs/bootstrap/img/glyphicons-halflings.png
d700a93337122b390b90bbfe21e64f71 *reports/libs/bootstrap/javascript/bootstrap.min.js
33d85132f0154466fc017dd05111873d *reports/libs/bootstrap/javascript/jquery-1.10.1.min.js
35065c99915530281a328eae2a1960be *reports/libs/bootstrap/javascript/user.js
beee6e075d64d660bff121b73752db04 *rmarkdown/templates/batchqc/skeleton/skeleton.Rmd
b1f3e01bb67c37ff8d3ddebfcf9499f2 *rmarkdown/templates/batchqc/template.yaml
c203d8173515362943c131c00721cc0a *shiny/BatchQC/server.R
2d2f6897aea838ab1804333ff1f8b0e0 *shiny/BatchQC/ui.R
