0d4ca00c2a8a6f9556d12cffd81a8723 *DESCRIPTION
91d413d5150ec06f174978545498270d *INDEX
6a65e47832e3754e7703bca7b789351e *Meta/Rd.rds
72bde95ee56432b57d56d58473569fd2 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
8b09540d0e83bf78c0bbab465c8ff3b3 *Meta/hsearch.rds
4ccd1955fabba916cb7e769da8fcb4f1 *Meta/links.rds
9dbd7b8af76b9b0fe6c871ae5b8a4c27 *Meta/nsInfo.rds
9bd6cd0423833ef317a4732ba5e2d64e *Meta/package.rds
d38bc25b5546fa8ba645be9925ff02e5 *Meta/vignette.rds
ae59b8a6e95d660b2b63a851c68911a9 *NAMESPACE
d6c68f1fe41ced6e98a766a3757313da *R/Basic4Cseq
271ab1128954a8d63d53d9be25374267 *R/Basic4Cseq.rdb
f2c0bacd110e2e52d715b172bfee5099 *R/Basic4Cseq.rdx
371a0994c3f3c2931aed600ac0183fde *data/liverData.RData
ba5c985bdae524e41b9b8a24d0cebb38 *data/liverDataRaw.RData
cb12cab230a19f7373dab080cd9dfade *doc/index.html
0cded5c665295c5748d19bad3ffdd592 *doc/vignette.R
67392a702c2453b846903e0c1a42e6c0 *doc/vignette.Rnw
01e26dbf1859eb2dd18b21689b6a222f *doc/vignette.pdf
b90cc5bc0dca1138debae1179cb813f8 *extdata/RCircos_GRCm38_ideogram.csv
6cbaecaf4ed2293298343bfce751c258 *extdata/RCircos_HG19_ideogram.csv
00c1d1d92fa3a07f3403a5c039f899c7 *extdata/enzymeData.csv
6332710cc1a1ee8ef40cb95538a94929 *extdata/fetalLiverCutter.sam
4f671ebe3f1c6dc00177f7d50b8944df *extdata/fetalLiverShort.bam
614b15a01e9f8d0bd62458ec969845c7 *extdata/fetalLiverVP.bed
ab13942a15e17712f182b3b1c1e0363a *extdata/fetalLiver_finalFragments.csv
a3e529247e47214266dd2a252dfb039b *extdata/transInteractionData.txt
d39a2c0c80702059da9c6f99ae18a212 *extdata/veryShortExample.fastq
a80e603e40f7343b0bb97c1380df61c8 *extdata/veryShortLib.csv
e9e6b8add27c84f481a1839f9db793d1 *extdata/veryShortReference.fasta
ac34dfc4f22e37a2a286f31ddf7ecceb *extdata/veryShortReference.fasta.amb
06d4a319a43ef8e7bf7f0090e14e6433 *extdata/veryShortReference.fasta.ann
88c3629f9b4134224e100e04d1fcc251 *extdata/veryShortReference.fasta.bwt
cfc9149681143ca9aff12fe0842e34d1 *extdata/veryShortReference.fasta.pac
3748a2acac76bf91845f10bd7df8dabb *extdata/veryShortReference.fasta.sa
e914f0f7d046dc7494eeb2e2d3348ed2 *extdata/vfl_aagctt_catg_mm9_54_vp.csv
cb8113f292b6668dd86d61425d18203a *help/AnIndex
1358d84785e24d105a5e2e5e683655de *help/Basic4Cseq.rdb
195a7d27925889064b3969867dd60e06 *help/Basic4Cseq.rdx
51e8b1f4e3ba78bd82502203429c9430 *help/aliases.rds
9fd4ce8714ea1bc6882654fff545320f *help/paths.rds
b0396dcda1cd7d361ec27978c73e54f7 *html/00Index.html
8586c4ff6e99e70b5e238adf251d271c *html/Data4Cseq-class.html
61fddd8375f2a46359a18f78b7b061b5 *html/Data4Cseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
fb2adb1e20b54d7cc2f977ddd892900a *html/checkRestrictionEnzymeSequence.html
5250ac32e6e8e5a24989d1462abffcc7 *html/chooseNearCisFragments.html
6771891c67522088ff2e2678ddf632d4 *html/createVirtualFragmentLibrary.html
596ddfca7436041be0bbd62009bed55d *html/drawDigestionFragmentHistogram.html
6cdbb72b41d0e43a477930f7054391b4 *html/drawHeatmap.html
9aaa482806b3f9b872c99b280dc1822c *html/exportVisualizationFragmentData.html
08d41a5a80fd12276c5ca115f66be02d *html/getReadDistribution.html
4a2508c98f39edf8e7850c9b8155a3b8 *html/giveEnzymeSequence.html
f29a2f8e35579b58013063b3e50e1586 *html/importVisualizationFragmentData.html
01db1f116b651a25ca9c8153a1a4ab35 *html/liverData.html
30e1a26b5f1a9d95d0d380818b4cdc9c *html/liverDataRaw.html
64ad75381151bff8d12d73a008aae08b *html/normalizeFragmentData.html
aa64ed1bbe8529e6ec1417be85f01994 *html/plotTransInteractions.html
3991bbd815e270f6665b4b2a47bbab07 *html/prepare4CseqData.html
287050977ead0b45d419e22003b58607 *html/printBEDFragmentLibrary.html
c830c4ffe35a3d4319df772cd81c34c2 *html/printWigFile.html
20b0cad140dd69abfd07b24acad54c6f *html/readPointsOfInterestFile.html
24fd5584a8646283400f1150eab5d377 *html/readsToFragments.html
f9bfb1da39dfda6b0830b8ef3a985eea *html/simulateDigestion.html
5c7ad6489e0177ac655c3fb0f0119b58 *html/visualizeViewpoint.html
