plotPedigree {AlphaBeta} | R Documentation

## Plot Pedigree

### Description

Plotting Pedigree tree

### Usage

    plotPedigree(
      nodelist,
      edgelist,
      sampling.design,
      out.pdf = NULL,
      output.dir = NULL,
      plot.width = 11,
      plot.height = 8,
      vertex.label = NULL,
      vertex.size = 12,
      aspect.ratio = 2.5
    )

### Arguments

`nodelist` | input file containing information on generation times and pedigree lineages "extdata" called "nodelist.fn"
`edgelist` | input file containing edges "edgelist.fn"
`sampling.design` | "progenitor.intermediate"; "sibling"; "progenitor.endpoint";"tree"
`out.pdf` | output file name
`output.dir` | output directory
`plot.width` | plotting with
`plot.height` | plotting height
`vertex.label` | label vertix
`vertex.size` | size of vertix
`aspect.ratio` | aspect.ration

### Value

plot pedigree matrices file.

### Examples

    # Get some toy data
    file <- system.file("extdata/dm/","nodelist.fn", package="AlphaBeta")
    file2 <- system.file("extdata/dm/","edgelist.fn", package="AlphaBeta")
    plotPedigree(nodelist = file, edgelist=file2, sampling.design="sibling",vertex.label=TRUE,
     out.pdf="Plot", output.dir=getwd() )

[Package AlphaBeta version 1.4.0 Index]