sesame-package	sesame-package
as.data.frame.sesameQC	as.data.frame.sesameQC
betaToAF	betaToAF
BetaValueToMValue	BetaValueToMValue
binSignals	binSignals
bisConversionControl	bisConversionControl
bSubComplete	bSubComplete
bSubMostVariable	bSubMostVariable
bSubProbes	bSubProbes
buildControlMatrix450k	buildControlMatrix450k
checkLevels	checkLevels
chipAddressToSignal	chipAddressToSignal
cnSegmentation	cnSegmentation
compareMouseBloodReference	compareMouseBloodReference
compareMouseTissueReference	compareMouseTissueReference
createUCSCtrack	createUCSCtrack
ctl	ctl-methods
ctl,SigSet-method	ctl-methods
ctl<-	ctl-replace-methods
ctl<-,SigSet-method	ctl-replace-methods
deIdentify	deidentify
detectionMask	detectionMask
detectionPfixedNorm	detectionPfixedNorm
detectionPnegEcdf	detectionPnegEcdf
detectionPnegNorm	detectionPnegNorm
detectionPnegNormGS	detectionPnegNormGS
detectionPnegNormTotal	detectionPnegNormTotal
detectionPoobEcdf	detectionPoobEcdf
detectionPoobEcdf2	detectionPoobEcdf2
detectionZero	detectionZero
diffRefSet	diffRefSet
DML	DML
DMLShrinkage	DMLShrinkage
DMR	DMR
dyeBiasCorr	dyeBiasCorr
dyeBiasCorrMostBalanced	dyeBiasCorrMostBalanced
dyeBiasCorrTypeINorm	dyeBiasCorrTypeINorm
estimateCellComposition	estimateCellComposition
estimateLeukocyte	estimateLeukocyte
extra	extra-methods
extra,SigSet-method	extra-methods
extra<-	extra-replace-methods
extra<-,SigSet-method	extra-replace-methods
extractDesign	extractDesign
formatVCF	formatVCF
getAFTypeIbySumAlleles	getAFTypeIbySumAlleles
getAutosomeProbes	getAutosomeProbes
getBetas	getBetas
getBinCoordinates	getBinCoordinates
getNormCtls	getNormCtls
getProbesByChromosome	getProbesByChromosome
getProbesByGene	getProbesByGene
getProbesByRegion	getProbesByRegion
getProbesByTSS	getProbesByTSS
getRefSet	getRefSet
getSexInfo	getSexInfo
IG	IG-methods
IG,SigSet-method	IG-methods
IG<-	IG-replace-methods
IG<-,SigSet-method	IG-replace-methods
IGpass	IGpass
II	II-methods
II,SigSet-method	II-methods
II<-	II-replace-methods
II<-,SigSet-method	II-replace-methods
IIpass	IIpass
inferEthnicity	inferEthnicity
inferSex	inferSex
inferSexKaryotypes	inferSexKaryotypes
inferStrain	inferStrain
inferTypeIChannel	inferTypeIChannel
initFileSet	initFileSet
initialize,SigSet-method	SigSet-class
IR	IR-methods
IR,SigSet-method	IR-methods
IR<-	IR-replace-methods
IR<-,SigSet-method	IR-replace-methods
IRpass	IRpass
isUniqProbeID	isUniqProbeID
makeExampleSeSAMeDataSet	makeExampleSeSAMeDataSet
makeExampleTinyEPICDataSet	makeExampleTinyEPICDataSet
mapFileSet	mapFileSet
meanIntensity	meanIntensity
MValueToBetaValue	MValueToBetaValue
noob	noob
noobsb	noobsb
oobG	oobG-methods
oobG,SigSet-method	oobG-methods
oobG<-	oobG-replace-methods
oobG<-,SigSet-method	oobG-replace-methods
oobGpass	oobGpass
oobR	oobR-methods
oobR,SigSet-method	oobR-methods
oobR<-	oobR-replace-methods
oobR<-,SigSet-method	oobR-replace-methods
oobRpass	oobRpass
openSesame	openSesame
openSesameToFile	openSesameToFile
parseGEOSignalABFile	parseGEOSignalABFile
pOOBAH	detectionPoobEcdf
pOOBAH2	detectionPoobEcdf2
predictAgeHorvath353	predictAgeHorvath353
predictAgePheno	predictAgePheno
predictAgeSkinBlood	predictAgeSkinBlood
predictMouseAgeInMonth	predictMouseAgeInMonth
print.fileSet	print.fileSet
print.sesameQC	print.sesameQC
probeID_designType	probeID_designType
probeNames	probeNames-methods
probeNames,SigSet-method	probeNames-methods
pval	pval-methods
pval,SigSet-method	pval-methods
pval<-	pval-replace-methods
pval<-,SigSet-method	pval-replace-methods
qualityMask	qualityMask
qualityRank	qualityRank
readFileSet	readFileSet
readIDATpair	readIDATpair
reIdentify	reIdentify
reopenSesame	reopenSesame
resetMask	resetMask
restoreMask	restoreMask
RGChannelSetToSigSets	RGChannelSetToSigSets
saveMask	saveMask
scrub	scrub
scrubSoft	scrubSoft
searchIDATprefixes	searchIDATprefixes
segmentBins	segmentBins
sesame	sesame-package
sesameQC	sesameQC
sesamize	sesamize
show,SigSet-method	show-methods
show,SigSetList-method	SigSetList-methods
signalMU	signalMU
SigSet	SigSet-class
SigSet-class	SigSet-class
SigSetList	SigSetList
SigSetList-class	SigSetList-class
SigSetList-methods	SigSetList-methods
SigSetListFromIDATs	SigSetListFromIDATs
SigSetListFromPath	SigSetListFromPath
SigSetsToRGChannelSet	SigSetsToRGChannelSet
SigSetToRatioSet	SigSetToRatioSet
sliceFileSet	sliceFileSet
SNPcheck	SNPcheck
subsetSignal	subsetSignal
summaryExtractCfList	summaryExtractCfList
summaryExtractSlope	summaryExtractSlope
topSegments	topSegments
totalIntensities	totalIntensities
totalIntensityZscore	totalIntensityZscore
twoCompsEst2	twoCompsEst2
visualizeGene	visualizeGene
visualizeProbes	visualizeProbes
visualizeRegion	visualizeRegion
visualizeSegments	visualizeSegments
_PACKAGE	sesame-package
