b37b22ef5f8dc62d4572e36199cd5f86 *DESCRIPTION
bbf70f1e68a216c62e0492249f10fd6b *INDEX
15070fe8fbc2bc45766facafb912584d *Meta/Rd.rds
6c968ae0c6dab2f3b4ebddaace62c606 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
ff9b1a7e588227e20171088e53a8feee *Meta/hsearch.rds
1cd6544a66e476d31555c025c4a42ea1 *Meta/links.rds
9a91f853bddddd12f98dd069f33cfc71 *Meta/nsInfo.rds
100fb73f6dd802596cabcbdc0376eb35 *Meta/package.rds
57e47f28a8c73d0247d668bc344fa874 *Meta/vignette.rds
6c805fea390d70bd99e4c95280dbf6b6 *NAMESPACE
a428483e6f22a9407fc4af3699cc902a *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/universalmotif
bf17767c445430a896798894fd36f484 *R/universalmotif.rdb
43842065eb7007e41adf738cddd2b428 *R/universalmotif.rdx
9a33fcaf97a0044d67f3b521e9c41f4d *REFERENCES.bib
0fedcef806ff67bd21def474f8c0f686 *data/ArabidopsisMotif.rda
d0b4e05425d4ee6535314c72c6f96324 *data/ArabidopsisPromoters.rda
75ca7a6b6b0fd17a284eca6bfebe024c *data/JASPAR2018_CORE_DBSCORES.rda
5c13cfbc05b51a3f49fa10a9e5cee450 *data/examplemotif.rda
53beda63dcdcce418f110b05e89da6e4 *data/examplemotif2.rda
e67f3884b40298918a3ef76a27a876aa *doc/Introduction.R
ac1578612c100dc3d2ffa7374d096172 *doc/Introduction.Rmd
8c9269ff3bcaebd177083bac9af42d65 *doc/Introduction.pdf
c772de98d628dd74608b1874147f0ef3 *doc/IntroductionToSequenceMotifs.R
e238e036f3e43be02e7c195487192656 *doc/IntroductionToSequenceMotifs.Rmd
6d435add0c7255310edcf30c423687af *doc/IntroductionToSequenceMotifs.pdf
a5b78385fb812fd1b90aeb5950ebad35 *doc/MotifComparisonAndPvalues.R
a9e0a899c3b17e18bf4cf5805c79c2fb *doc/MotifComparisonAndPvalues.Rmd
d76878ab905978f0097212a605b743aa *doc/MotifComparisonAndPvalues.pdf
39e95e5101bbadf33478884b1bfc5b47 *doc/MotifManipulation.R
7285a228e01a4c429d0c1013cd07949d *doc/MotifManipulation.Rmd
6635ebff2bb1cd0aba880ffb2e573427 *doc/MotifManipulation.pdf
768ac6b8905c71ab566fa0880e76d6e7 *doc/SequenceSearches.R
cb662229cb20b32df2c34714aab4351b *doc/SequenceSearches.Rmd
e627f25214da4d7b2ee1e80ce93c8878 *doc/SequenceSearches.pdf
4a69912e711cd40320550553927bb3b5 *doc/index.html
a2b30de61d36bf4757f9bf99489d0214 *extdata/cisbp.txt
4cecec99fe4ab206f13975d6093eb915 *extdata/hocomoco.txt
923edc3048e0ff7f261e9214ca0fafcb *extdata/homer.txt
e6b0f8b479b936f984ef01243e8f5df5 *extdata/jaspar.txt
39207ee07de83b383f8521d916c75774 *extdata/meme_full.txt
d11f29343e052cc45f7ecd0583068aa0 *extdata/meme_minimal.txt
582aba832d47b73437c26bb3d404b33e *extdata/sites.txt
a3928e8c4de05761f0bf112a7af420b8 *extdata/transfac.txt
bbb960134e63f044692949eb649459ca *extdata/uniprobe_full.txt
3e0c0a6e00821a9e857ef83ae18d27e8 *extdata/uniprobe_minimal.txt
4ecf8e379448fe83328c641cdbfee51c *extdata/universalmotif.txt
ff76806b3576fcde477d3515f7fd370b *figures/example.png
27b1b0694d342115148d3a79102c0fdd *help/AnIndex
a363dd5d31266a849faae3ed6f1127c0 *help/aliases.rds
a8df660846d2d741d863fda82d1679d1 *help/paths.rds
f6c7011ddd808aaef53325d6c96fcf4c *help/universalmotif.rdb
43824e7566e0227a6c5b4d633cb5244b *help/universalmotif.rdx
25db0b8e1e6f8c49be76013630cf22bb *html/00Index.html
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b6763e6916890c631fdc3f2643803b1a *html/R.css
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cbd37eb38816d49f8aab969bbe7bb063 *html/convert_motifs.html
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7dbd9152d6f0af55aeee1f8f35f69cf2 *html/create_sequences.html
53e90b85b6075899dabb3d6e10709720 *html/enrich_motifs.html
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7a217f5ae202af7fea14a1f6d241dfb6 *html/examplemotif2.html
0d5b252a76016c281dbe5ba84e510fa6 *html/filter_motifs.html
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53e8a6e0ca7b8b1e32d08da4c7aeae95 *html/make_DBscores.html
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866a4e6b570fc682354d10345f1d9228 *html/read_cisbp.html
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ca3f1dac1a1dfd94548c46ab82c324cf *html/read_jaspar.html
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8b5eccb512e576ea641c4f2d7efe3c60 *html/read_transfac.html
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6e740b8d31cc0c268c9477701393bcf1 *html/sample_sites.html
601bd2580d81238a1a2079b8dc36abe4 *html/scan_sequences.html
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54a156884870fc20e06b7650b6f5bcdb *html/shuffle_sequences.html
a88fc810e73e5b008b1345739055f36c *html/switch_alph.html
0b1c59cff7eec0ec23936a226cc77256 *html/trim_motifs.html
3331acfea2631c7ca10598b5f436bd34 *html/universalmotif-class.html
aa5e8aceda49175d5dce4289d59f2039 *html/universalmotif-pkg.html
6c70ca23a2060b1bfebbefe93367f75e *html/utilities.html
24906981f6a1232bf239b0d1bdf8f1a9 *html/utils-motif.html
51519549184b279733fcec1425bf5000 *html/utils-sequence.html
89e4abfffd53ea2409d5c6510072b698 *html/view_motifs.html
15fe91ecfba77d11d6d99ac17930069d *html/write_homer.html
bb99013523ecdf1981f292ea1007bb74 *html/write_jaspar.html
4ca4dacfb9acc38b8f2d4eb0da47f88c *html/write_matrix.html
840e3010881fd4bc43e4e80ae1e2687a *html/write_meme.html
8ce8a54e36a3e8183aefb52c3cb8fe80 *html/write_motifs.html
52b2fdd8484ce7642c48df901150b470 *html/write_transfac.html
5bf6b38afd0b5a4ba8d225a4c49f313c *libs/i386/universalmotif.dll
b4099fc88b0328d28a1690f3f402c6f4 *libs/x64/universalmotif.dll
