Terms {transcriptogramer} | R Documentation

## Get terms

### Description

Gets the content of the Terms slot of an object of class Transcriptogram.

### Usage

    Terms(object)

    ## S4 method for signature 'Transcriptogram'
    Terms(object)

### Arguments

`object` | An object of class Transcriptogram.

### Value

This method returns the content of the Terms slot of an object of class Transcriptogram.

### Author(s)

Diego Morais

### See Also

differentiallyExpressed, transcriptogramPreprocess, GSE9988, GPL570, Hs900, HsBPTerms, association, transcriptogramStep1, transcriptogramStep2, clusterEnrichment

### Examples

    transcriptogram <- transcriptogramPreprocess(association, Hs900, 50)
    ## Not run:
    transcriptogram <- transcriptogramStep1(transcriptogram, GSE9988, GPL570)
    transcriptogram <- transcriptogramStep2(transcriptogram)
    levels <- c(rep(FALSE, 3), rep(TRUE, 3))
    transcriptogram <- differentiallyExpressed(transcriptogram, levels, 0.01)
    transcriptogram <- clusterEnrichment(transcriptogram, species = "Homo sapiens",
    pValue = 0.005)
    Terms(transcriptogram)

    ## End(Not run)

[Package transcriptogramer version 1.9.2 Index]