topGO-package {topGO} | R Documentation

## Enrichment analysis for Gene Ontology

### Description

topGO package provides tools for testing GO terms while accounting for the topology of the GO graph. Different test statistics and different methods for eliminating local similarities and dependencies between GO terms can be implemented and applied.

### Details

Package: | topGO
Type: | Package
Version: | 1.0
Date: | 2006-10-02
License: | What license is it under?

TODO: An overview of how to use the package, including the most important functions

### Author(s)

Adrian Alexa, J\"org Rahnenf\"uhrer

Maintainer: Adrian Alexa

### References

Alexa A., Rahnenf\"uhrer J., Lengauer T., Improved scoring of functional groups from gene expression data by decorrelating GO graph structure, Bioinformatics 22(13): 1600-1607, 2006

### See Also

`topGOdata-class`, `groupStats-class`, `getSigGroups-methods`

[Package topGO version 2.39.1 Index]