Metric {similaRpeak} | R Documentation

## Metric class

### Description

A class which represents a abstract Metric object which is used to quantify the similarity between two profiles covering the same range.

The `Metric` class should not be directly instanciated. It should be used as the parent class of a specific metric class.

### Usage

    Metric

### Format

An object of class `R6ClassGenerator` of length 24.

### Value

The `Metric$new` function returns a `Metric` object which contains the information about the two profiles and the threshold used to calculate the metric. It can be used, as many times needed, to calculate the specified metric.

### Constructor

Create a `Metric` object.

`Metric$new(profile1, profile2, threshold = NULL)`

The `Metric` object inherites those functions:

- `getMetric` A function that returns the value of the calculated metric

- `getInfo` A function that returns a description of the metric with the metric value.

- `getType` A function that returns the unique name associated to this metric

- `calculateMetric` A function that modifies the values of the two profiles and the threshold. The new values (profile1, profile2, threshold) are passed as arguments.

### Author(s)

Astrid Deschenes

### See Also

- `MetricFactory` for using the recommanded interface to calculate all available metrics separately or togheter.

[Package similaRpeak version 1.19.0 Index]