cutoffByTF {sevenC} | R Documentation

## Optimal cutoff values for logistic regression models.

### Description

This dataset contains optimal cutoff scores for the response value of logistic regression models. The cutoff is based on optimal F1-scores. A separate model was trained For each of 124 TF ChIP-seq datasets in human GM12878 cells. The model performance was calculated with Hi-C and ChIA-PET interactions using 10-fold cross-validation.

### Usage

    cutoffByTF

### Format

An object of class `tbl_df` with 121 rows and 3 columns:

TF

  Transcription factor name

max_cutoff

  The optimal cutoff on the logistic regression response value

max_f1

  The optimal f1-score associated to the `max_cutoff` value

### See Also

`modelBest10Avg` and `TFspecificModels`

[Package sevenC version 1.7.0 Index]