sesamize {sesame} | R Documentation

## "fix" an RGChannelSet (for which IDATs may be unavailable) with Sesame The input is an RGSet and the output is a sesamized minfi::GenomicRatioSet

### Description

"fix" an RGChannelSet (for which IDATs may be unavailable) with Sesame The input is an RGSet and the output is a sesamized minfi::GenomicRatioSet

### Usage

    sesamize(rgSet, naFrac = 1, BPPARAM = SerialParam(), HDF5 = NULL)

### Arguments

`rgSet` | an RGChannelSet, perhaps with colData of various flavors
`naFrac` | maximum NA fraction for a probe before it gets dropped (1)
`BPPARAM` | get parallel with MulticoreParam(n)
`HDF5` | is the rgSet HDF5-backed? if so, avoid eating RAM (perhaps)

### Value

a sesamized GenomicRatioSet

[Package sesame version 1.5.3 Index]