ab9e07b7280595c23ac86cc7c3e12d7a *DESCRIPTION
900680b0d4cbc3e877c83f0c40825892 *INDEX
109d4496bbfe0fa5e6f90565cc8ee85b *Meta/Rd.rds
82ae14c82d2d7f344ac9768a2908adb1 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
9826a73ca96bdfe31a7da1782c776788 *Meta/hsearch.rds
5cc3374f7f660c93d6558801aeb8f66e *Meta/links.rds
3865bf091fe8b08467f57311ba3b3e91 *Meta/nsInfo.rds
b4a015ebf8bda97a9d7cec974741f023 *Meta/package.rds
e3160a0b2b9dcff266e17db24df9b3d9 *Meta/vignette.rds
745a248d66abbd2455d3fbd851723b27 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/segmentSeq
0ce564ec1578f73f60040068c9f98848 *R/segmentSeq.rdb
2434e9226186b37a456e178bc0bd8058 *R/segmentSeq.rdx
e0fdeb3e6f073566bf1115a64d7ebeda *data/hSL.RData
aa64b9983d25a48733870ed50d1b6b77 *doc/index.html
15f4c7df8fd84000cb3a9bf405b4e688 *doc/methylationAnalysis.R
5f7a9bccf604aff19003d3e514230544 *doc/methylationAnalysis.Rnw
292982889550238d611734624f2ca55a *doc/methylationAnalysis.pdf
2177f37f8db17c1eaa5773248b58431d *doc/segmentSeq.R
dc3e5ea6060691ece51c17a273a3b0b5 *doc/segmentSeq.Rnw
0b2cec6893ac37918ef2d65c201f78a3 *doc/segmentSeq.pdf
3e06d773f7fc796b9f8abfbd87859c91 *extdata/SL10.txt
d4614b7e3a4b1d43982ddfb5756b3c55 *extdata/SL26.txt
b743c46dcbdbebc79f25c8402c664099 *extdata/SL32.txt
557c9c052a14cbeb5794a5d40520ee98 *extdata/SL9.txt
f9e97daa13b3f4e7b2554cfc838e20b6 *extdata/short_13_C24_col_trim.fastq_CG_methCalls.gz
6202ab9dfdfca80c02a65f4e6bb528fa *extdata/short_18B_C24_C24_trim.fastq_CG_methCalls.gz
67b74bf8edfa841d34a31dfd467c8c3f *extdata/short_Sample_17A_trimmed.fastq_CG_methCalls.gz
87ff08b3a90565b2d8b826373e30dc0e *extdata/short_Sample_28_trimmed.fastq_CG_methCalls.gz
980b344cf620586acacd236f46a7a13c *help/AnIndex
8b260a699755d9b2f143b02de0fd6e57 *help/aliases.rds
06d5475320a6e14e3be9bc524c57bf4c *help/paths.rds
a5a014da07b2ed1769864a4bc2b19553 *help/segmentSeq.rdb
f4e554816ce680e94fab7d94a691372a *help/segmentSeq.rdx
d58a059511823e449a6ec443dcc59ac7 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a56582c9525dbd09fc0728404ca5244d *html/SL.html
378eefe7044071b964fd6431f2260973 *html/alignmentClass-class.html
c6988976625a167394746fa158427c7e *html/alignmentData-class.html
ac3c6aebda3407fa4ef95b03b9b39b82 *html/alignmentMeth-class.html
e91c4375c0fd240f05db2dc4b9d18c00 *html/averageMethylationRegions.html
a0e7a389d79a90f57f13191d600aff0f *html/classifySeg.html
9d9dc1843f81e51535287d894713ee32 *html/findChunks.html
d09902c0ee20598b768096da6ebaf5c0 *html/getCounts.html
dd9fa3560b1689e7bde14a6aa0dc68ec *html/getOverlaps.html
bc7c1dba3086d399b02cc4b33fb7f927 *html/givenExpression.html
ab74d7371d9ecffa7eddd52e3ffe9ba9 *html/hSL.html
a243a365d58e35ac1eb155ff253fdb3b *html/heuristicSeg.html
2a735864ea991bbfb596cafba866314b *html/lociData-class.html
16bb3a2e1896a89f4336a7c516c9e41d *html/lociLikelihoods.html
5b934ecdd9a78fa421c289996adcdb40 *html/mergeMethSegs.html
e01773c49cb1fb736d93365dd485c0dc *html/methData-class.html
81961eeef3b47d6144f5f3a2df508e73 *html/normaliseNC.html
7d9f65a3d002ff9ffd8d3f7c77437676 *html/plotGenome.html
c1febebc68d7cce11caaa76800f01697 *html/plotMeth.html
5c214ac42b9f30f98f0fa7ce44ca9628 *html/plotMethDistribution.html
1d22eb9b89e745f104852f4f40def4ba *html/processAD.html
342e9ec36aadc34baa490797ee027f13 *html/readMethods.html
c22d8960577a9b94f92fc9036924b613 *html/readMeths.html
3e2ff8245795086d040b262355e5cbc1 *html/segClass-class.html
aa61f799429cee80b2e3a1a754b08485 *html/segData-class.html
66e7db6cc1aaef3a8b11554ec95bdd30 *html/segMeth-class.html
7f2f69d761576f35212f59314ae5c16d *html/segmentSeq-package.html
abe9faf165f199b01eb5f73727318606 *html/selectLoci.html
cf75ab9acd61e1b35aa3c3fe6f8fccac *html/summariseLoci.html
671d172f1cef8e38ed388b177d344bce *html/thresholdFinder.html
