scDatEx {scDD} | R Documentation

## Data: Toy example data

### Description

Toy example data in `SingleCellExperiment` format for 500 genes to illustrate how to generate simulated data from example data using `simulateSet`.

### Usage

    data(scDatEx)

### Format

An object of class `SingleCellExperiment` containing data for 500 genes for 142 samples (78 from condition 1 and 64 from condition 2). Condition labels (1 or 2) are stored in the colData slot. The assays slot contains both normcounts and counts for illustration, but these objects are identical.

### Value

An RData object, see Format section for details

### References

Korthauer KD, Chu LF, Newton MA, Li Y, Thomson J, Stewart R, Kendziorski C. A statistical approach for identifying differential distributions in single-cell RNA-seq experiments. Genome Biology. 2016 Oct 25;17(1):222. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1077-y

### Examples

    # load toy example data
    data(scDatEx)

[Package scDD version 1.11.1 Index]