validation {scDD} | R Documentation

## validation

### Description

Draw validation plots to show that the simulated dataset emulates characteristics of observed dataset.

### Usage

    validation(MV, DEIndex, Zeropercent_Base, Simulated_Data, numGenes)

### Arguments

`MV` | Mean and Variance matrix for observed data
`DEIndex` | Index for genes chosen to be DE (can be NULL)
`Zeropercent_Base` | Zero percentage for corresponding gene expression values
`Simulated_Data` | Simulated dataset
`numGenes` | numeric value for the number of genes to simulate

### Value

Validation plots

### References

Korthauer KD, Chu LF, Newton MA, Li Y, Thomson J, Stewart R, Kendziorski C. A statistical approach for identifying differential distributions in single-cell RNA-seq experiments. Genome Biology. 2016 Oct 25;17(1):222. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1077-y

[Package scDD version 1.11.1 Index]