proFIA-package {proFIA} | R Documentation

## Process FIA-HRMS datasets.

### Description

Process FIA-HRMS datasets passing from raw data (mzMl, CDF,mzXML format) to a peak table suitable for statistical anlysis.

### Details

The full workflow is composed of the following chain of function. `proFIAset`=>`group.FIA`=>`impute.FIA` and the full process is easy to automate using the analyzeAcquisitionFIA which do all the steps easely. Resulting table may be easely exported using the 3 exports function (`exportDataMatrix`,`exportVariableMetadata` `exportSampleMetadata`) Groups may be visualised using `plotEICs` to plot all the EICs of a group. An overview of an acquisition may be otained using the `plot` function.

[Package proFIA version 1.13.0 Index]