write.html {phenoTest} | R Documentation

## Write a data.frame to an html file.

### Description

Creates an html file with links and plots from a table.

### Usage

    write.html(x, links, tiny.pic, tiny.pic.size = 100, title = "", file, digits = 3)

### Arguments

`x` | Object of class `data.frame`.
`links` | Object of class `list` with one item per column in x. If we want the ith column of x to have links to a site or local file we will have to write those links into the ith element of links.
`tiny.pic` | Object of class `list` with one item per column in x. If we want the ith column of x to show plots instead of text we will have to write the path to the plots into the ith element of links.
`tiny.pic.size` | size of the pictures if any.
`title` | Title that will be shown on top of the html file.
`file` | path and name of the file that will be created.
`digits` | number of digits that will be shown in numeric columns of x.

### Author(s)

Evarist Planet

### See Also

write.csv, write.table, htmlpage

### Examples

    ##
    ##Code has been commented to avoid the creation of files
    ##
    #(x <- data.frame(gene.symbol=c('AARS','ABCF1','ABLIM1'),value=c(2.054,30.024,5.0221),plot=rep('Open',3)))
    #tiny.pic <- links <- vector('list',length=ncol(x))
    #links[[1]] <- paste('http://www.genecards.org/index.php?path=/Search/keyword/',x[,1])
    #for (i in 1:nrow(x)) {
    #  png(paste('~/Desktop/',x[i,1],'.png',sep=''))
    #  plot(1:3,log(1:3))
    #  dev.off()
    #}
    #tiny.pic[[3]] <- links[[3]] <- paste(x[,1],'.png',sep='')
    #write.html(x,links=links,tiny.pic=tiny.pic,file='~/Desktop/x.html',title='My html test')

[Package phenoTest version 1.35.1 Index]