pathprint.Dr.gs {pathprint} | R Documentation

## Pathprint genesets - D. rerio

### Description

Pathways and genesets used by pathprint for D. rerio arrays, referenced by Entrez Gene ID

### Usage

    pathprint.Dr.gs

### Details

Gene sets were inferred by homology from the human genesets, `pathprint.Hs.gs`, using the HomoloGene database, www.ncbi.nlm.nih.gov/homologene

### Source

O. Hofmann

### References

Sayers et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Research (2011) vol. 39 (Database issue) pp. D38-51
Altschuler, G. M., O. Hofmann, I. Kalatskaya, R. Payne, S. J. Ho Sui, U. Saxena, A. V. Krivtsov, S. A. Armstrong, T. Cai, L. Stein and W. A. Hide (2013). "Pathprinting: An integrative approach to understand the functional basis of disease." Genome Med 5(7): 68.

### Examples

    data("pathprint.Dr.gs")
    pathprint.Dr.gs[grep("ZN175_7728", names(pathprint.Dr.gs))]

[Package pathprint version 1.17.0 Index]