setOrderingFilter {monocle} | R Documentation

## Marks genes for clustering

### Description

The function marks genes that will be used for clustering in subsequent calls to clusterCells. The list of selected genes can be altered at any time.

### Usage

    setOrderingFilter(cds, ordering_genes)

### Arguments

`cds` | the CellDataSet upon which to perform this operation
`ordering_genes` | a vector of feature ids (from the CellDataSet's featureData) used for ordering cells

### Value

an updated CellDataSet object

[Package monocle version 2.15.0 Index]