Bootstrap-class {kimod} | R Documentation

## Class `Bootstrap`: Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)

### Description

Bootstrap to DiStatis object.

### Features

1. Bootstrap Implementation

2. Confidence Intervals from Bootstrap implementation

3. Plotting Bootstrap

### Fields

- Ratios.Boot Ratios (with Bonferroni Correction for all observations in compromise from all dimensions)

- Comparisions.Boot Comparision (difference between observations) from all dimensions

- Elipses.Boot List of all projections from the elipses plot.

- Stability.Boot Bootstrap Stability

- QRO.Boot Rpresentation Quality of observations (Bootstrap)

- EigValues.Boot confidence interval for eigenvalues (from SVD Compromise)

- Inertia.Boot confidence interval for inertia(

### Accesors

- `Ratios.Boot(x)`, `Ratios.Boot(x) <- value`: Ratios (with Bonferroni Correction for all observations in compromise from all dimensions)

- `Comparisions.Boot(x)`, `Comparisions.Boot(x) <- value`: Comparision (difference between observations) from all dimensions.

- `Elipses.Boot(x)`, `Elipses.Boot(x) <- value`:List of all projections from the elipses plot.

- `Stability.Boot(x)`, `Stability.Boot(x) <- value`: Bootstrap Stability.

- `QRO.Boot(x)`, `QRO.Boot(x) <- value`: Representation Quality of observations (Bootstrap)

- `EigValues.Boot(x)`, `EigValues.Boot(x) <- value`: confidence interval for eigenvalues (from SVD Compromise)

- `Inertia.Boot(x)`, `Inertia.Boot(x) <- value`: confidence interval for inertia(%) of all dimensions (from SVD Compromise).

### Bootstrap-general-functions

print

  Basic output for Bootstrap class

summary

  Basic statistics for Bootstrap class

Bootstrap

  Getters for their respective slots.

### Author(s)

M L Zingaretti, J A Demey-Zambrano, J L Vicente Villardon, J R Demey

### References

1. Efron, B.,Tibshirani, RJ. (1993). An introduction to the bootstrap. New York: Chapman and Hall. 436p.

2. Ringrose, T.J. (1992). Bootstrapping and Correspondence Analysis in Archaeology. Journal of Archaeological. Science.19:615-629.

### Examples

     showClass("Bootstrap")

[Package kimod version 1.15.0 Index]