# Hyper Enrichment

## Documentation for package ‘hypeR’ version 1.3.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

ggempty | An empty ggplot
ggeplot | Enrichment plot implemented in ggplot
ggvenn | Venn diagram implemented in ggplot
hyp | A hyp object
hypeR | Perform hyper enrichment
hyperdb_fetch | Fetch gsets from hypeR-db
hyperdb_info | Print hypeR-db gsets
hyp_dots | Visualize hyp/multihyp objects as a dots plot
hyp_emap | Visualize hyp/multihyp objects as an enrichment map
hyp_hmap | Visualize hyp/multihyp objects as a hiearchy map
hyp_show | Convert hyp object to an interactive datatable
hyp_to_excel | Export hyp/multihyp object to excel
hyp_to_rmd | Export hyp object to rmarkdown
hyp_to_table | Export hyp/multihyp object to table
msigdb_download_all | Download all gsets from msigdb for a species
msigdb_download_one | Fetch gsets from msigdb
msigdb_fetch | Fetch gsets from msigdb
msigdb_info | Print msigdb gsets
multihyp | A multihyp object
pvector | A push/pop capable vector
rgsets | Relational genesets