npci.index.to.be.removed {fCI} | R Documentation

## gene indexes that will be considered as targets

### Description

This function will be depreciated.

### Usage

    npci.index.to.be.removed(expr.by.fold, d, symmetric.fold, max.rank,
    l.max.rank, r.max.rank)

### Arguments

`expr.by.fold` | a 1xN matrix of fold change between case and control for every genes in N genes
`d` | the dimension of the data, if RNA-Seq or LC-MS/MS data, d=1
`symmetric.fold` | a booleam valuable indicating whether to use the same fold change cutoff for upregulation and downregulation
`max.rank` | the maximum fold change, i.e 3 fold
`l.max.rank` | the maximum fold change for downregulation, i.e 1.5 fold
`r.max.rank` | the maximum fold change for upregulation, i.e 1.5 fold

### Details

TBD

### Value

`indexes` | gene (indexes) considered as differentially expressed

### Note

TBD

### Author(s)

Shaojun Tang

### References

http://software.steenlab.org/fCI/

### See Also

TBD

### Examples

     print("Function to be discarded!")

[Package fCI version 1.17.0 Index]