isMeta {dittoSeq} | R Documentation

## Tests if an input is the name of a meta.data slot in a target object.

### Description

Tests if an input is the name of a meta.data slot in a target object.

### Usage

    isMeta(test, object, return.values = FALSE)

### Arguments

`test` | String or vector of strings, the "potential.metadata.name"(s) to check for.
`object` | A target Seurat or SingleCellExperiment object
`return.values` | Logical which sets whether the function returns a logical `TRUE`/`FALSE` versus the `TRUE` `test` values . Default = `FALSE`

### Details

For Seurat objects, also returns TRUE for the input `"ident"` because, for all dittoSeq visualiztions, `"ident"` will retrieve a Seurat objects' clustering slot.

### Value

Returns a logical or logical vector indicating whether each instance in `test` is a meta.data slot within the `object`. Alternatively, returns the values of `test` that were indeed metadata slots if `return.values = TRUE`.

### Author(s)

Daniel Bunis

### See Also

`getMetas` for returning all metadata slots of an `object`

`meta` for obtaining the contants of metadata slots

### Examples

    example(importDittoBulk, echo = FALSE)

    # To check if something is a metadata slot
    isMeta("timepoint", object = myRNA) # FTRUE
    isMeta("nCount_RNA", object = myRNA) # FALSE

    # To test if many things are metadata of an object
    isMeta(c("age","groups"), myRNA) # FALSE, TRUE

    # 'return.values' input is especially useful in these cases.
    isMeta(c("age","groups"), myRNA,
        return.values = TRUE)

    # Alternatively, to see all metadata slots of an object, use getMetas
    getMetas(myRNA)

[Package dittoSeq version 0.99.14 Index]