Package: dittoSeq
Type: Package
Title: User Friendly Single-Cell and Bulk RNA Sequencing Visualization
Version: 0.99.14
Author: Daniel Bunis
Maintainer: Daniel Bunis <daniel.bunis@ucsf.edu>
Description: A set of functions for generating publication-ready (sc)RNAseq
    figures with as simple of coding input as possible. This package attempts
    to be colorblind friendly by default & novice-to-coding user-friendly. It
    mimics and extends Seurat plotting capabilities, and enables side-by-side
    analysis of bulk and scRNAseq data.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Depends: ggplot2
Imports: methods, colorspace (>= 1.4), gridExtra, cowplot, reshape2,
        pheatmap, grDevices, ggrepel, ggridges, stats, utils,
        SummarizedExperiment, SingleCellExperiment, edgeR, S4Vectors
Suggests: plotly, testthat, Seurat (>= 2.2), DESeq2, knitr, BiocStyle,
        scRNAseq
biocViews: Software, Visualization, RNASeq, SingleCell, GeneExpression,
        Transcriptomics, DataImport
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/dittoSeq
git_branch: master
git_last_commit: 14cee5f
git_last_commit_date: 2020-04-03
Date/Publication: 2020-04-07
NeedsCompilation: no
Packaged: 2020-04-08 07:43:14 UTC; biocbuild
Built: R 4.0.0; ; 2020-04-08 17:29:44 UTC; windows
