dittoSeq {dittoSeq} | R Documentation

## dittoSeq

### Description

This package was built to make the analysis and visualization of single-cell and bulk RNA-sequencing data accessible for both experience and novice coders, and for colorblind individuals.

### Details

Includes many plotting functions (`dittoPlot`, `dittoDimPlot`, `dittoBarPlot`, `dittoHeatmap`, ...), color adjustment functions (`Simulate`, `Darken`, `Lighten`), and helper funtions (`meta`, `gene`, `isMeta`, `getMetas`, ...) to aid in making sense of single cell or bulk RNA sequencing data. All included plotting functions produce a ggplot (or plotly, or pheatmap for dittoHeatmap) and can spit out full plot with just a few arguments. Many additional arguments are available for customization to generate complex publication-ready figures.

Default color panel is colorblind friendly [Wong B, "Points of view: Color blindness." Nature Methods, 2011.](https://www.nature.com/articles/nmeth.1618).

For more information, to give feedback, or to suggest new features, see the github, [here](https://github.com/dtm2451/DittoSeq).

### Author(s)

Daniel Bunis

[Package dittoSeq version 0.99.14 Index]