cnrmaAffy {crlmm} | R Documentation

## quantile normalize nonpolymorphic markers

### Description

Quantile normalize nonpolymorphic markers to hapmap reference distribution

### Usage

    cnrmaAffy(cnSet, seed = 1, verbose = TRUE)

### Arguments

`cnSet` | Object of class `CNSet`
`seed` | Random number seed
`verbose` | Logical.

### Value

Returns logical. Normalized intensities are written to the alleleA `ff_matrix` stored in the `CNSet` assayData.

### Author(s)

R. Scharpf

### See Also

`snprmaAffy`

[Package crlmm version 1.45.0 Index]