GeneSetResultCollection-class {cpvSNP} | R Documentation

## Class `"GeneSetResultCollection"`

### Description

Objects of this class store results from running gene set methods such as GLOSSI or VEGAS. GeneSetResultCollection objects contain a list of GeneSetResult objects (one result for each GeneSet)

### Objects from the Class

Objects can be created by calls of `glossi` or `vegas`.

### Methods

No methods defined with class "GeneSetResultCollection" in the signature.

### Accessors

In the code snippets below, `object` is a GeneSetResultCollection object.

`geneSetName(object)`:

  A list of the names of the gene sets.

`pValue(object)`:

  A list of numeric p-values.

`degreesOfFreedom(object)`:

  List of integer values of the degrees of freedom used in the statistical tests performed on each gene set.

`statistic(object)`:

  A list of numeric values corresponding to the statistics calculated from the tests performed on each gene set.

### Author(s)

Caitlin McHugh

### See Also

`GeneSetResult`, `GLOSSIResultCollection`

### Examples

    showClass("GeneSetResultCollection")

[Package cpvSNP version 1.19.0 Index]