importNCLscan {circRNAprofiler} | R Documentation

## Import circRNAs detected by NCLscan

### Description

The function importNCLscan is specifically designed to read and adapt the NCLscan v1.4 output file (e.g. MyProject.result). Only intragenic circRNAs are kept in the analysis. See https://github.com/TreesLab/NCLscan for more details.

### Usage

    importNCLscan(pathToFile)

### Arguments

`pathToFile` | A character string specifying the path to the file containing the detected circRNAs.

### Value

A data frame.

### Examples

    # Path to an example file containing circRNAs detected by NCLscan
    pathToFile <- system.file("extdata", "nclscan/circRNAs_001.txt",
        package="circRNAprofiler")

    # Inner function.
    # Import circRNAs
    importNCLscan(pathToFile)

[Package circRNAprofiler version 1.1.0 Index]