plotGridSearchPerplexity {celda} | R Documentation

## Visualize perplexity of a list of celda models

### Description

Visualize perplexity of every model in a celdaList, by unique K/L combinations

### Usage

    plotGridSearchPerplexity(celdaList, sep = 1)

### Arguments

`celdaList` | Object of class 'celdaList'.
`sep` | Numeric. Breaks in the x axis of the resulting plo.t.

### Value

A ggplot plot object showing perplexity as a function of clustering parameters.

### Examples

    data(celdaCGSim, celdaCGGridSearchRes)
    ## Run various combinations of parameters with 'celdaGridSearch'
    celdaCGGridSearchRes <- resamplePerplexity(
      celdaCGSim$counts,
      celdaCGGridSearchRes)
    plotGridSearchPerplexity(celdaCGGridSearchRes)

[Package celda version 1.3.4 Index]