prepareGSEApathways {cTRAP} | R Documentation

## Prepare GSEA pathways

### Description

Prepare GSEA pathways

### Usage

    prepareGSEApathways(diffExprGenes, geneSize)

### Arguments

`diffExprGenes` | Numeric: named vector of differentially expressed genes whose names are gene identifiers and respective values are a statistic that represents significance and magnitude of differentially expressed genes (e.g. t-statistics)
`geneSize` | Number: top and bottom number of differentially expressed genes for gene set enrichment (only used if `method = gsea`)

### Value

List of top and bottom differentially expressed genes

[Package cTRAP version 1.5.0 Index]