sample_phosphodata {blacksheepr} | R Documentation

## sample_phosphodata

### Description

Example phosphoprotein data for Outlier analysis This example data is a subset of the data used in the CPTAC3 Breast Cancer exploration study: (doi: 10.1038/nature18003). Each row corresponds to a phosphoprotein site, and each column is a sample. The values within the table are normalized massspec phosphoprotein values.

### Usage

    sample_phosphodata

### Format

A data frame with 15532 rows and 76 variables:

TCGA-A2-A0CM

  phosphoprotein levels for each gene

TCGA-A2-A0D2

  phosphoprotein levels for each gene

TCGA-A2-A0EQ

  phosphoprotein levels for each gene

TCGA-A2-A0EV

  phosphoprotein levels for each gene

TCGA-A2-A0EX

  phosphoprotein levels for each gene

TCGA-A2-A0EY

  phosphoprotein levels for each gene

TCGA-A2-A0SW

  phosphoprotein levels for each gene

TCGA-A2-A0SX

  phosphoprotein levels for each gene

TCGA-A2-A0T3

  phosphoprotein levels for each gene

TCGA-A2-A0T6

  phosphoprotein levels for each gene

TCGA-A2-A0YC

  phosphoprotein levels for each gene

TCGA-A2-A0YD

  phosphoprotein levels for each gene

TCGA-A2-A0YF

  phosphoprotein levels for each gene

TCGA-A2-A0YG

  phosphoprotein levels for each gene

TCGA-A2-A0YM

  phosphoprotein levels for each gene

TCGA-A7-A0CE

  phosphoprotein levels for each gene

TCGA-A7-A0CJ

  phosphoprotein levels for each gene

TCGA-A7-A13F

  phosphoprotein levels for each gene

TCGA-A8-A06N

  phosphoprotein levels for each gene

TCGA-A8-A06Z

  phosphoprotein levels for each gene

TCGA-A8-A076

  phosphoprotein levels for each gene

TCGA-A8-A079

  phosphoprotein levels for each gene

TCGA-A8-A08Z

  phosphoprotein levels for each gene

TCGA-A8-A09G

  phosphoprotein levels for each gene

TCGA-AN-A04A

  phosphoprotein levels for each gene

TCGA-AN-A0AJ

  phosphoprotein levels for each gene

TCGA-AN-A0AL

  phosphoprotein levels for each gene

TCGA-AN-A0AM

  phosphoprotein levels for each gene

TCGA-AN-A0FK

  phosphoprotein levels for each gene

TCGA-AN-A0FL

  phosphoprotein levels for each gene

TCGA-AO-A03O

  phosphoprotein levels for each gene

TCGA-AO-A0J6

  phosphoprotein levels for each gene

TCGA-AO-A0J9

  phosphoprotein levels for each gene

TCGA-AO-A0JC

  phosphoprotein levels for each gene

TCGA-AO-A0JE

  phosphoprotein levels for each gene

TCGA-AO-A0JJ

  phosphoprotein levels for each gene

TCGA-AO-A0JL

  phosphoprotein levels for each gene

TCGA-AO-A0JM

  phosphoprotein levels for each gene

TCGA-AO-A126

  phosphoprotein levels for each gene

TCGA-AO-A12B

  phosphoprotein levels for each gene

TCGA-AO-A12D

  phosphoprotein levels for each gene

TCGA-AO-A12E

  phosphoprotein levels for each gene

TCGA-AO-A12F

  phosphoprotein levels for each gene

TCGA-AR-A0TR

  phosphoprotein levels for each gene

TCGA-AR-A0TT

  phosphoprotein levels for each gene

TCGA-AR-A0TV

  phosphoprotein levels for each gene

TCGA-AR-A0TX

  phosphoprotein levels for each gene

TCGA-AR-A0U4

  phosphoprotein levels for each gene

TCGA-AR-A1AP

  phosphoprotein levels for each gene

TCGA-AR-A1AS

  phosphoprotein levels for each gene

TCGA-AR-A1AV

  phosphoprotein levels for each gene

TCGA-AR-A1AW

  phosphoprotein levels for each gene

TCGA-BH-A0AV

  phosphoprotein levels for each gene

TCGA-BH-A0BV

  phosphoprotein levels for each gene

TCGA-BH-A0C1

  phosphoprotein levels for each gene

TCGA-BH-A0C7

  phosphoprotein levels for each gene

TCGA-BH-A0DD

  phosphoprotein levels for each gene

TCGA-BH-A0DG

  phosphoprotein levels for each gene

TCGA-BH-A0E1

  phosphoprotein levels for each gene

TCGA-BH-A0E9

  phosphoprotein levels for each gene

TCGA-BH-A18N

  phosphoprotein levels for each gene

TCGA-BH-A18Q

  phosphoprotein levels for each gene

TCGA-BH-A18U

  phosphoprotein levels for each gene

TCGA-C8-A12L

  phosphoprotein levels for each gene

TCGA-C8-A12T

  phosphoprotein levels for each gene

TCGA-C8-A12U

  phosphoprotein levels for each gene

TCGA-C8-A12V

  phosphoprotein levels for each gene

TCGA-C8-A12Z

  phosphoprotein levels for each gene

TCGA-C8-A130

  phosphoprotein levels for each gene

TCGA-C8-A131

  phosphoprotein levels for each gene

TCGA-C8-A134

  phosphoprotein levels for each gene

TCGA-C8-A135

  phosphoprotein levels for each gene

TCGA-C8-A138

  phosphoprotein levels for each gene

TCGA-D8-A142

  phosphoprotein levels for each gene

TCGA-E2-A154

  phosphoprotein levels for each gene

TCGA-E2-A158

  phosphoprotein levels for each gene

### Source

https://cptac-data-portal.georgetown.edu/cptac/s/S029

[Package blacksheepr version 1.1.0 Index]