build_hmm_annots {annotatr} | R Documentation

## A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.

### Description

A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.

### Usage

    build_hmm_annots(genome = c("hg19"),
      annotations = annotatr::builtin_annotations())

### Arguments

`genome` | The genome assembly.
`annotations` | A character vector of valid chromatin state annotatin codes.

### Value

A `GRanges` object.

[Package annotatr version 1.13.1 Index]