plotPosBias {Starr} | R Documentation

## Bias of hybridzation, depending on base position in sequence.

### Description

`plotPosBias` generates a plot showing the bias of hybridzation, depending on base position in sequence.

### Usage

    plotPosBias(intensity, sequence, main="", ylim)

### Arguments

`intensity` | a vector of type numeric, containing the measured intensities
`sequence` | a vector of type character, containing the sequneces
`main` | head of the plot
`ylim` | ylim of plot

### Author(s)

Benedikt Zacher zacher@lmb.uni-muenchen.de

### Examples

    ##
    sequence <- unlist(lapply(1:50000, function(x) {paste(sample(c("A","T","C","G"),prob=c(0.3,0.3,0.2,0.2),25,replace=TRUE), collapse="")}))
    values <- runif(50000,min=-2,max=2)
    plotPosBias(values, sequence)

[Package Starr version 1.43.0 Index]