plotcrosstalk {StarBioTrek} | R Documentation

## Preparation for plotting cross-talk

### Description

plot_cross_talk function takes as input pathway data and prepares the data to visualize (e.g. ggplot2, qqgraph, igraph)

### Usage

    plotcrosstalk(pathway_plot, gs_expre)

### Arguments

`pathway_plot` | pathway
`gs_expre` | a gene expression matrix

### Value

a list with correlation matrix and gene set for each gene

### Examples

    formatplot<-plotcrosstalk(pathway_plot=pathway[1:6],gs_expre=tumo)

[Package StarBioTrek version 1.13.0 Index]